Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021610_P003 | Maize | cytosol | 53.67 | 45.57 |
| KXG36299 | Sorghum | nucleus | 54.49 | 44.59 |
| Zm00001d006473_P001 | Maize | cytosol | 53.67 | 42.45 |
| GSMUA_Achr5P07300_001 | Banana | cytosol | 8.81 | 38.85 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 56.93 | 38.23 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 56.12 | 33.79 |
| GSMUA_Achr10P... | Banana | cytosol | 22.35 | 30.51 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 55.79 | 29.74 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 56.28 | 28.87 |
| Bra006990.1-P | Field mustard | nucleus | 20.23 | 22.92 |
| CDX73561 | Canola | nucleus | 20.23 | 22.92 |
| CDX78168 | Canola | nucleus | 20.23 | 22.92 |
| AT3G53320.1 | Thale cress | nucleus | 20.39 | 22.6 |
| AT2G37070.1 | Thale cress | nucleus | 16.48 | 19.06 |
| KRH67641 | Soybean | nucleus | 22.84 | 18.52 |
| KRG95926 | Soybean | nucleus | 21.7 | 18.24 |
| CDY18461 | Canola | endoplasmic reticulum | 12.72 | 18.06 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 20.07 | 17.85 |
| Bra017208.1-P | Field mustard | nucleus | 12.89 | 17.32 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 20.55 | 16.13 |
| PGSC0003DMT400004371 | Potato | nucleus | 23.33 | 11.0 |
Protein Annotations
| EnsemblPlants:Os05t0121800-01 | EnsemblPlantsGene:Os05g0121800 | EntrezGene:4337656 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | ProteinID:AAV31222.1 |
| ProteinID:BAF16415.1 | ProteinID:BAS92028.1 | RefSeq:XP_015640824.1 | SEG:seg | UniParc:UPI000045039F | UniProt:Q60F39 |
| MapMan:20.1.5.1.2 | : | : | : | : | : |
Description
Conserved hypothetical protein. (Os05t0121800-01)
Coordinates
chr5:+:1195081..1199226
Molecular Weight (calculated)
63807.0 Da
IEP (calculated)
9.909
GRAVY (calculated)
-0.467
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALSLIDVA AEDDLLLDLT SPPPLHPDPP HAGCDEVMAA EASRLDPAGD SPEMRRVVDP DGATEEAPEQ SESPKRRKAK AGVNLRKSLA WDSAFFTSEG
101: VLDTEELAVV NSTFRKAQGS RLPGIAEEMR RSGESTTSTL ESESWVMENL ETELFDNVRA SIQRSHGNPG KAPGVTAVIS KPPKSKANVP RVAARKGVDL
201: MPQSKIRAPI STSQGAAGGK QRIQATLKEP TTARVPISGS TEVKPSLKPP RALPRVATMR APTNTAVASG IPDKRSSTGG VVNRQTVGKS VNNSVSAHSR
301: PGGVTKSTST SKSGALPSSL SSSAAATAAS IGNMLGQKPK SSTLSNKSRI AQRIPVRSTS RTDVNKANPA RASRNNIPTG GKSNRVSPSI SPSSSVDSLS
401: SVVSGASTAS TVGKMSHTSE SFSTRSSSLS PSLRNSNDHA PTRADADTQG KGSKPSGLRM PTPKIGYFDA SIDQQIGAHM QVQPMKIQCS PQLSSAQMGD
501: PASSILSQPE SRLAASPHEK KSSVQSKASP LLPLEVVQIE LEPSQAMEHE VCTPQPCPVV AAAAAAAADT AKENIPALHQ NIQPNDGAGS LAVDLICQRL
601: STISLGDATD LAS
101: VLDTEELAVV NSTFRKAQGS RLPGIAEEMR RSGESTTSTL ESESWVMENL ETELFDNVRA SIQRSHGNPG KAPGVTAVIS KPPKSKANVP RVAARKGVDL
201: MPQSKIRAPI STSQGAAGGK QRIQATLKEP TTARVPISGS TEVKPSLKPP RALPRVATMR APTNTAVASG IPDKRSSTGG VVNRQTVGKS VNNSVSAHSR
301: PGGVTKSTST SKSGALPSSL SSSAAATAAS IGNMLGQKPK SSTLSNKSRI AQRIPVRSTS RTDVNKANPA RASRNNIPTG GKSNRVSPSI SPSSSVDSLS
401: SVVSGASTAS TVGKMSHTSE SFSTRSSSLS PSLRNSNDHA PTRADADTQG KGSKPSGLRM PTPKIGYFDA SIDQQIGAHM QVQPMKIQCS PQLSSAQMGD
501: PASSILSQPE SRLAASPHEK KSSVQSKASP LLPLEVVQIE LEPSQAMEHE VCTPQPCPVV AAAAAAAADT AKENIPALHQ NIQPNDGAGS LAVDLICQRL
601: STISLGDATD LAS
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.