Factsheet for AT3G53320.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006990.1-P	Field mustard	nucleus	62.57	63.96
CDX78168	Canola	nucleus	62.57	63.96
CDX73561	Canola	nucleus	59.31	60.63
AT2G37070.1	Thale cress	nucleus	40.33	42.08
HORVU6Hr1G008700.1	Barley	cytosol	5.97	35.48
GSMUA_Achr5P07300_001	Banana	cytosol	7.78	30.94
VIT_08s0040g02430.t01	Wine grape	nucleus	31.1	24.96
GSMUA_Achr10P...	Banana	cytosol	18.81	23.16
Os05t0121800-01	Rice	nucleus	22.6	20.39
HORVU2Hr1G101950.1	Barley	cytosol	8.68	20.25
KRG95926	Soybean	nucleus	26.58	20.16
KRH67641	Soybean	nucleus	27.49	20.11
Zm00001d021610_P003	Maize	cytosol	21.88	16.76
Zm00001d006473_P001	Maize	cytosol	22.78	16.26
KXG36299	Sorghum	nucleus	21.16	15.62
HORVU1Hr1G011900.6	Barley	nucleus	23.87	14.46
TraesCS1B01G076900.1	Wheat	nucleus	22.42	12.18
TraesCS1D01G059700.2	Wheat	nucleus	23.69	11.39
TraesCS1A01G058600.1	Wheat	nucleus	23.51	10.88
PGSC0003DMT400004371	Potato	nucleus	24.95	10.62
HORVU7Hr1G087000.5	Barley	plastid	5.79	7.98

Protein Annotations

MapMan:20.1.5.1.2	EntrezGene:824500	ProteinID:AEE79068.1	EMBL:AK117956	ArrayExpress:AT3G53320	EnsemblPlantsGene:AT3G53320
RefSeq:AT3G53320	TAIR:AT3G53320	RefSeq:AT3G53320-TAIR-G	EnsemblPlants:AT3G53320.1	TAIR:AT3G53320.1	Unigene:At.35206
EMBL:BT005909	ProteinID:CAB67639.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005737	GO:GO:0005856
GO:GO:0005875	GO:GO:0008017	GO:GO:0008150	GO:GO:0009524	GO:GO:0072686	RefSeq:NP_190900.1
PO:PO:0000037	PO:PO:0000084	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0004507
PO:PO:0007611	PO:PO:0007616	PO:PO:0009009	PO:PO:0009010	PO:PO:0009031	PO:PO:0009046
PO:PO:0009052	PO:PO:0025022	PANTHER:PTHR33737	PANTHER:PTHR33737:SF3	UniProt:Q9LFI5	UniParc:UPI0000060DA3
SEG:seg	:	:	:	:	:

Description

At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]

Coordinates

chr3:-:19769150..19772453

Molecular Weight (calculated)

59159.9 Da

IEP (calculated)

10.014

GRAVY (calculated)

-0.820

Length

553 amino acids

Sequence
(BLAST)

001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.