Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P07300_001 | Banana | cytosol | 3.38 | 31.65 |
| HORVU6Hr1G008700.1 | Barley | cytosol | 2.23 | 31.18 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 13.62 | 25.69 |
| GSMUA_Achr10P... | Banana | cytosol | 8.77 | 25.39 |
| AT3G53320.1 | Thale cress | nucleus | 10.62 | 24.95 |
| CDX78168 | Canola | nucleus | 10.15 | 24.4 |
| Bra006990.1-P | Field mustard | nucleus | 10.15 | 24.4 |
| CDX73561 | Canola | nucleus | 9.92 | 23.84 |
| Os05t0121800-01 | Rice | nucleus | 11.0 | 23.33 |
| KRH67641 | Soybean | nucleus | 13.54 | 23.28 |
| KRG95926 | Soybean | nucleus | 12.77 | 22.77 |
| CDY18461 | Canola | endoplasmic reticulum | 7.46 | 22.45 |
| Bra017208.1-P | Field mustard | nucleus | 7.69 | 21.93 |
| AT2G37070.1 | Thale cress | nucleus | 8.85 | 21.7 |
| Zm00001d021610_P003 | Maize | cytosol | 10.85 | 19.53 |
| KXG36299 | Sorghum | nucleus | 10.54 | 18.29 |
| Zm00001d006473_P001 | Maize | cytosol | 10.62 | 17.81 |
| HORVU2Hr1G101950.1 | Barley | cytosol | 3.15 | 17.3 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 12.0 | 17.09 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 12.92 | 16.5 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 14.15 | 16.0 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 13.92 | 15.15 |
| HORVU7Hr1G087000.5 | Barley | plastid | 4.31 | 13.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400004371 | EnsemblPlantsGene:PGSC0003DMG400001737 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF3 | PGSC:PGSC0003DMG400001737 | SEG:seg |
| UniParc:UPI0002968FC9 | UniProt:M0ZNB9 | MapMan:20.1.5.1.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400001737]
Coordinates
chr9:-:6494693..6501224
Molecular Weight (calculated)
138909.0 Da
IEP (calculated)
4.536
GRAVY (calculated)
-0.470
Length
1300 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDLEVNEFSL IDFSSENDNL IGNSSSPLPS WGLEEYPSSG AINIQEEMDM AGKGNHDEQF PQLHESKEPE KARRKGKVNL RKSLAWDSAF FTDAGVLDAD
0101: ELSCMIKGGD KQTLPMIEED VRQSLDSIST LESDNLTLEH IESELFGDIR ASIQKVAIPT SGDLSAKTDN GANSSAKKVD LASKDRSISR TTSGASLKPP
0201: KVNTKLQPVS ASKRASLDIT RVKTDNDSME ISTASVRGAQ TPKASALNKT SRVMPKPTTS MKPSSVGSSP AMKMHATRSS SDSSGSTSSD KTAKSSIPVA
0301: RRKVDSKPIA QPSASAKLKT PSKAAVKSKL PSGNSAVSAY LMSSKINANI SPASSISEWS SVSSSSSAIQ RSSKLRTSFD TSSCRSFDSD TSTLDINNHL
0401: SDQKSDKPEI RGTTLPRESL KQAGSVSRPA SMMKPTGLRM PSPKMGYFDG VKAVRTPNGT HSNSSTALYK TEATICSPKV NSNTKAKSVK VPLRANRKPE
0501: TLKHLSPLSS SDKSNISDNH SGTQSSSASP VPKTETIVCS PKGNSNTKAK SVRVPLRANK RPETLKHRSP VSSSDKSNVS DNHIGGPSDI TLIPELSLEV
0601: QHAISGANTS KNMDVLAEEP DPFEHIRSAG WVATQGENQG IASALNNEED MAEGPDTVEH VADASLISSM SENQGIASIL NNEEVVAEGP DTVDHVADAS
0701: LVAAILKNEE VVAKGSDTVD HVADASLVAA ILKNEEVVAK GSDTVDHVAD ASLVAAILKN EEVVAKGSDT VDHVADASLV AAILKNEEVV AKGSDTVDHV
0801: ADASLVAAIL KNEEVVAKGS DTVEHVADAS LVAAILNNEE VVAKGSDTVE HVADASLVAA ILNNEEVVAE GPDTVEHVAD DGLVAIKSEQ QVIVNNDIHE
0901: EVVADEPDTV EHVACDGLVA IKTENEVTVN NDTNVINSEH QRIEEVVADE PDTVEHVAGD GLFAIKSENQ VIVNNDTDVI MSEHQRIEEV VADEPDTVEH
1001: VAGDGFVVMK SENQVSLNND TVIIKSESQR VASTLNNKDF VAEGPDTVED VPGDGLVAIE SENHSVLNND ILAGLAATKG QKQGVMEHEM NLDTIEKIDI
1101: KAVEVSITEN IRLCQTEDED GVGVQCNVNY NLDVPSQTNE MNLEDAVNGY NLDMPRQMNE MNLEDDVNGD LKHTKIDHVE RESDSTFRGD EGRVDVKDDL
1201: NTPEKTNAKK NVCANQADQL NSLVEEVSMS PFSNKVESLM NKLAYLSLNT PEIAVRRMPF AVKNSSGDCL DFCEGAEHVV GKTDLDLPSL QINHKENNNL
0101: ELSCMIKGGD KQTLPMIEED VRQSLDSIST LESDNLTLEH IESELFGDIR ASIQKVAIPT SGDLSAKTDN GANSSAKKVD LASKDRSISR TTSGASLKPP
0201: KVNTKLQPVS ASKRASLDIT RVKTDNDSME ISTASVRGAQ TPKASALNKT SRVMPKPTTS MKPSSVGSSP AMKMHATRSS SDSSGSTSSD KTAKSSIPVA
0301: RRKVDSKPIA QPSASAKLKT PSKAAVKSKL PSGNSAVSAY LMSSKINANI SPASSISEWS SVSSSSSAIQ RSSKLRTSFD TSSCRSFDSD TSTLDINNHL
0401: SDQKSDKPEI RGTTLPRESL KQAGSVSRPA SMMKPTGLRM PSPKMGYFDG VKAVRTPNGT HSNSSTALYK TEATICSPKV NSNTKAKSVK VPLRANRKPE
0501: TLKHLSPLSS SDKSNISDNH SGTQSSSASP VPKTETIVCS PKGNSNTKAK SVRVPLRANK RPETLKHRSP VSSSDKSNVS DNHIGGPSDI TLIPELSLEV
0601: QHAISGANTS KNMDVLAEEP DPFEHIRSAG WVATQGENQG IASALNNEED MAEGPDTVEH VADASLISSM SENQGIASIL NNEEVVAEGP DTVDHVADAS
0701: LVAAILKNEE VVAKGSDTVD HVADASLVAA ILKNEEVVAK GSDTVDHVAD ASLVAAILKN EEVVAKGSDT VDHVADASLV AAILKNEEVV AKGSDTVDHV
0801: ADASLVAAIL KNEEVVAKGS DTVEHVADAS LVAAILNNEE VVAKGSDTVE HVADASLVAA ILNNEEVVAE GPDTVEHVAD DGLVAIKSEQ QVIVNNDIHE
0901: EVVADEPDTV EHVACDGLVA IKTENEVTVN NDTNVINSEH QRIEEVVADE PDTVEHVAGD GLFAIKSENQ VIVNNDTDVI MSEHQRIEEV VADEPDTVEH
1001: VAGDGFVVMK SENQVSLNND TVIIKSESQR VASTLNNKDF VAEGPDTVED VPGDGLVAIE SENHSVLNND ILAGLAATKG QKQGVMEHEM NLDTIEKIDI
1101: KAVEVSITEN IRLCQTEDED GVGVQCNVNY NLDVPSQTNE MNLEDAVNGY NLDMPRQMNE MNLEDDVNGD LKHTKIDHVE RESDSTFRGD EGRVDVKDDL
1201: NTPEKTNAKK NVCANQADQL NSLVEEVSMS PFSNKVESLM NKLAYLSLNT PEIAVRRMPF AVKNSSGDCL DFCEGAEHVV GKTDLDLPSL QINHKENNNL
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.