Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G101950.1 | Barley | cytosol | 69.89 | 27.43 |
| GSMUA_Achr5P07300_001 | Banana | cytosol | 25.81 | 17.27 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 84.95 | 8.65 |
| GSMUA_Achr10P... | Banana | cytosol | 38.71 | 8.02 |
| AT3G53320.1 | Thale cress | nucleus | 35.48 | 5.97 |
| CDX78168 | Canola | nucleus | 27.96 | 4.81 |
| CDX73561 | Canola | nucleus | 27.96 | 4.81 |
| Bra006990.1-P | Field mustard | nucleus | 27.96 | 4.81 |
| CDY18461 | Canola | endoplasmic reticulum | 19.35 | 4.17 |
| AT2G37070.1 | Thale cress | nucleus | 23.66 | 4.15 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 30.11 | 4.06 |
| Bra017208.1-P | Field mustard | nucleus | 18.28 | 3.73 |
| KRG95926 | Soybean | nucleus | 29.03 | 3.7 |
| KRH67641 | Soybean | nucleus | 30.11 | 3.7 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 29.03 | 3.46 |
| HORVU7Hr1G087000.5 | Barley | plastid | 12.9 | 2.99 |
| PGSC0003DMT400004371 | Potato | nucleus | 31.18 | 2.23 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G008700.1 | EnsemblPlantsGene:HORVU6Hr1G008700 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | SEG:seg | UniParc:UPI000B465C2F |
| UniProt:A0A287T8Z6 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:15872529..15872958
Molecular Weight (calculated)
9967.8 Da
IEP (calculated)
10.207
GRAVY (calculated)
-0.371
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: HGSRLLRGIA EELRRSTEST TSTLDSESFV LEILKTELFD NVRASIQRTL GKPDKAPGVA FASSKTPRAT AKAPPVTARN GVDRIPPVSC STC
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.