Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G008700.1 | Barley | cytosol | 8.65 | 84.95 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 76.67 | 68.76 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 81.05 | 64.35 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 80.83 | 61.76 |
| Os05t0121800-01 | Rice | nucleus | 38.23 | 56.93 |
| Zm00001d021610_P003 | Maize | cytosol | 35.27 | 44.6 |
| KXG36299 | Sorghum | nucleus | 35.82 | 43.66 |
| Zm00001d006473_P001 | Maize | cytosol | 35.93 | 42.32 |
| HORVU2Hr1G101950.1 | Barley | cytosol | 10.95 | 42.19 |
| GSMUA_Achr5P07300_001 | Banana | cytosol | 5.81 | 38.13 |
| GSMUA_Achr10P... | Banana | cytosol | 14.24 | 28.95 |
| AT3G53320.1 | Thale cress | nucleus | 14.46 | 23.87 |
| CDX78168 | Canola | nucleus | 12.92 | 21.81 |
| CDX73561 | Canola | nucleus | 12.92 | 21.81 |
| Bra006990.1-P | Field mustard | nucleus | 12.92 | 21.81 |
| AT2G37070.1 | Thale cress | nucleus | 11.06 | 19.06 |
| CDY18461 | Canola | endoplasmic reticulum | 8.65 | 18.29 |
| KRG95926 | Soybean | nucleus | 14.46 | 18.11 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 15.22 | 17.8 |
| Bra017208.1-P | Field mustard | nucleus | 8.87 | 17.76 |
| KRH67641 | Soybean | nucleus | 14.68 | 17.72 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 12.81 | 16.98 |
| HORVU7Hr1G087000.5 | Barley | plastid | 6.9 | 15.71 |
| PGSC0003DMT400004371 | Potato | nucleus | 17.09 | 12.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G011900.6 | EnsemblPlantsGene:HORVU1Hr1G011900 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | SEG:seg | UniParc:UPI000B4841B3 |
| UniProt:A0A287EN95 | MapMan:20.1.5.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:29082174..29086494
Molecular Weight (calculated)
95068.6 Da
IEP (calculated)
9.288
GRAVY (calculated)
-0.470
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALSLIDVS GEEDDFLLDL ASPPQHPDPP PRAAPGASAV AADSDRPAAG SPPPTAGQAV DPAEQAPERA QSPKKAKPKG GVNLRKSLAW DKAFFTSEGV
101: LDTEELGIVN STFRKSHGSR LLPGIAEELR RSTESTTSTL DSESFVLESL ETELFDNVRA SIQRTLGKPD KAPGMASASS KTPRATAKAP PVTARKGVDR
201: IPQAQSKIRP PASTSNGSVG GSKQRPQVTL KEPAAGRVAV SKAAEAKPSS KPPRALPRVA TMRAPTNTAV TSGISDKRSS TGGVVNRQTI AKSANSSANV
301: PSRPGGGTKN NSTSKSGALS SAASSSLHSA PMAGGKTKSP TLISKNRTTQ RIPIRASSRS DIRKVDPARA SRNKSHGEGA SPIVSPSSSV DSMCSVISGV
401: STASTVGRAS HTSETFSTRS SSLSPSTRKS NDHPLTTLPR PQIVAEGQAS RTFSDNVKSD VNTSTQGNGF KPSGLRRPTP KIGYFDAEKS VEQKAGARAQ
501: LQPTKVLFSP LATQSSWIPS TPKTIPASLT FEQEEPKSRA AAPSQTKASP SLPLKVAQSE LKPSKVTEPE ASQAKASTPL RLTVSRIEVK QSKLTEPEAS
601: QAKASTPLPI KLDRTEVNPS KVTEHDASQT KALAAAMEVE LLEVIEHAVE APMVSEHGVQ MLETGPLVAM DIAEEEGILA LNQNVQANGD ISSSTVELSS
701: CASGQQQSET TPAPCEESVS SQTKVSPSLP LGAAKMEVEP VNVTENEACT PQTSPVLAAM DIAKMEVELV NVSENEACTP QTSPVLAAMD IAKENIPAVD
801: TAKGNVQPGG FPSPLKENIL ASHQNIQPKE HMTPVKGSIV ASHTNVQAVG EMTPVSLLSQ KLSSISLGQV TGEATPLTHK PSSISQGQSN GEATPLTLLA
901: QKLSSISLGD ATD
101: LDTEELGIVN STFRKSHGSR LLPGIAEELR RSTESTTSTL DSESFVLESL ETELFDNVRA SIQRTLGKPD KAPGMASASS KTPRATAKAP PVTARKGVDR
201: IPQAQSKIRP PASTSNGSVG GSKQRPQVTL KEPAAGRVAV SKAAEAKPSS KPPRALPRVA TMRAPTNTAV TSGISDKRSS TGGVVNRQTI AKSANSSANV
301: PSRPGGGTKN NSTSKSGALS SAASSSLHSA PMAGGKTKSP TLISKNRTTQ RIPIRASSRS DIRKVDPARA SRNKSHGEGA SPIVSPSSSV DSMCSVISGV
401: STASTVGRAS HTSETFSTRS SSLSPSTRKS NDHPLTTLPR PQIVAEGQAS RTFSDNVKSD VNTSTQGNGF KPSGLRRPTP KIGYFDAEKS VEQKAGARAQ
501: LQPTKVLFSP LATQSSWIPS TPKTIPASLT FEQEEPKSRA AAPSQTKASP SLPLKVAQSE LKPSKVTEPE ASQAKASTPL RLTVSRIEVK QSKLTEPEAS
601: QAKASTPLPI KLDRTEVNPS KVTEHDASQT KALAAAMEVE LLEVIEHAVE APMVSEHGVQ MLETGPLVAM DIAEEEGILA LNQNVQANGD ISSSTVELSS
701: CASGQQQSET TPAPCEESVS SQTKVSPSLP LGAAKMEVEP VNVTENEACT PQTSPVLAAM DIAKMEVELV NVSENEACTP QTSPVLAAMD IAKENIPAVD
801: TAKGNVQPGG FPSPLKENIL ASHQNIQPKE HMTPVKGSIV ASHTNVQAVG EMTPVSLLSQ KLSSISLGQV TGEATPLTHK PSSISQGQSN GEATPLTLLA
901: QKLSSISLGD ATD
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.