Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006990.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX73561 | Canola | nucleus | 87.25 | 87.25 |
| AT3G53320.1 | Thale cress | nucleus | 63.96 | 62.57 |
| CDY18461 | Canola | endoplasmic reticulum | 25.88 | 32.41 |
| GSMUA_Achr5P07300_001 | Banana | cytosol | 8.13 | 31.65 |
| HORVU6Hr1G008700.1 | Barley | cytosol | 4.81 | 27.96 |
| GSMUA_Achr10P... | Banana | cytosol | 19.04 | 22.94 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 28.65 | 22.5 |
| Os05t0121800-01 | Rice | nucleus | 22.92 | 20.23 |
| KRG95926 | Soybean | nucleus | 25.32 | 18.79 |
| KRH67641 | Soybean | nucleus | 26.06 | 18.65 |
| HORVU2Hr1G101950.1 | Barley | cytosol | 7.95 | 18.14 |
| Zm00001d021610_P003 | Maize | cytosol | 21.63 | 16.2 |
| KXG36299 | Sorghum | nucleus | 22.37 | 16.15 |
| Zm00001d006473_P001 | Maize | cytosol | 23.11 | 16.13 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 21.81 | 12.92 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 21.26 | 11.3 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 21.81 | 10.26 |
| PGSC0003DMT400004371 | Potato | nucleus | 24.4 | 10.15 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 21.63 | 9.79 |
| HORVU7Hr1G087000.5 | Barley | plastid | 6.28 | 8.48 |
Protein Annotations
| EnsemblPlants:CDX78168 | EnsemblPlantsGene:GSBRNA2T00129474001 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF3 | ProteinID:CDX78168 | ProteinID:CDX78168.1 |
| SEG:seg | UniParc:UPI0002542F21 | MapMan:20.1.5.1.2 | : | : | : |
Description
BnaA09g33630D
Coordinates
chrLK031814:-:1510637..1513536
Molecular Weight (calculated)
57677.1 Da
IEP (calculated)
9.764
GRAVY (calculated)
-0.742
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDNENKKSE GEVEGLGLID VAAEDDSLLF SSFPNPTSYE FSEADEDEKC LNNEKDQTFL RETDHCNEEI LVSSVEEKED VLQPRESPEP QKVTKSGKYN
101: LRKSLAWDNA FFTSEGVLEP EEISSMMESN HKSERKGLPT IQEDVNRSTE SISTFQSDCT VENSQEFVLF EDVRASIQRS AKASDAPTPG IDNELVAIEV
201: ATSPTSSTVE VLASQEKMKP KASPKKLSIR ANGSGKATKQ PVSATRGLST SVAKPTPNRL GKARLLSTTS TSRASLDVNK TKLEKDSKLP AGKEPSVPRI
301: PISRRPTFPK PAVVKSTLRA SAASKNELTS SCSSLESCAS AASSSTSHKS ALNPIKKKND SSSRIANRST SRGIMGQPRI PPQPTKKTTK SNLSSAGSIS
401: DCSSESSRAS ATSQTAKNIQ KTVSGANDTV RSLKNSKDAS VVQAGAKEGT KRVSAINGGL VPPGSMKQSG LRVPTPKIGF FDGGRQGSSS SAGKKVGKSP
501: VQESSNSKTK AAGSRHVVSA SSPKLQNKLY SKINAEDQLE G
101: LRKSLAWDNA FFTSEGVLEP EEISSMMESN HKSERKGLPT IQEDVNRSTE SISTFQSDCT VENSQEFVLF EDVRASIQRS AKASDAPTPG IDNELVAIEV
201: ATSPTSSTVE VLASQEKMKP KASPKKLSIR ANGSGKATKQ PVSATRGLST SVAKPTPNRL GKARLLSTTS TSRASLDVNK TKLEKDSKLP AGKEPSVPRI
301: PISRRPTFPK PAVVKSTLRA SAASKNELTS SCSSLESCAS AASSSTSHKS ALNPIKKKND SSSRIANRST SRGIMGQPRI PPQPTKKTTK SNLSSAGSIS
401: DCSSESSRAS ATSQTAKNIQ KTVSGANDTV RSLKNSKDAS VVQAGAKEGT KRVSAINGGL VPPGSMKQSG LRVPTPKIGF FDGGRQGSSS SAGKKVGKSP
501: VQESSNSKTK AAGSRHVVSA SSPKLQNKLY SKINAEDQLE G
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.