Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006473_P001 | Maize | cytosol | 75.83 | 73.29 |
| Os05t0121800-01 | Rice | nucleus | 44.59 | 54.49 |
| GSMUA_Achr5P07300_001 | Banana | cytosol | 7.21 | 38.85 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 43.66 | 35.82 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 43.26 | 31.83 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 44.73 | 29.13 |
| GSMUA_Achr10P... | Banana | cytosol | 17.36 | 28.95 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 44.46 | 27.87 |
| Bra006990.1-P | Field mustard | nucleus | 16.15 | 22.37 |
| CDX78168 | Canola | nucleus | 16.15 | 22.37 |
| CDX73561 | Canola | nucleus | 15.89 | 22.0 |
| AT3G53320.1 | Thale cress | nucleus | 15.62 | 21.16 |
| AT2G37070.1 | Thale cress | nucleus | 13.22 | 18.68 |
| KRG95926 | Soybean | nucleus | 18.02 | 18.52 |
| KRH67641 | Soybean | nucleus | 18.56 | 18.39 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 18.42 | 17.67 |
| CDY18461 | Canola | endoplasmic reticulum | 10.15 | 17.59 |
| Bra017208.1-P | Field mustard | nucleus | 10.68 | 17.54 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 15.75 | 17.13 |
| PGSC0003DMT400004371 | Potato | nucleus | 18.29 | 10.54 |
Protein Annotations
| EnsemblPlants:KXG36299 | EnsemblPlantsGene:SORBI_3002G315400 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | ProteinID:KXG36299 | ProteinID:KXG36299.1 |
| SEG:seg | UniParc:UPI00081AE6E0 | UniProt:A0A1B6QEF8 | MapMan:20.1.5.1.2 | : | : |
Description
hypothetical protein
Coordinates
chr2:-:68887410..68892912
Molecular Weight (calculated)
78810.0 Da
IEP (calculated)
9.682
GRAVY (calculated)
-0.529
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALSLIDVS AEDDLLYDLA SPDPPRPDPP RSGSLVGAAA TSSVGSPSAA GRAADPDGVM VDQARPERTE SPEQRKAKKG VNLRKSLAWD SAFFTSEGVL
101: DTEELAIVNS TFRKTQGSRL PGIMEEMRRS GESTTSTLEG ETWAMESLET ELFDNVRASI QRSLGKPDKV PGRPVAGSNT PKAIVNVPRV AAKKGVDRMA
201: QPKIRAPVST SQGAGGRQRP QATTKEPVAA RVNLPGVVEA KVSTKPPRAL PRVAMMRSST NTAIISGVSD KRSSTGGAVN RQAAGKTAST SAGQRSGGGT
301: NSTSISKSGP FTLATSSHGV TMDSKPDTKT KPATLSNKNR TAQRVPVRPA SKSGISKTIP SRSSGNKIPA KGHADRASPS ISPSSSMDSM SSVISGASTA
401: STVGRISHTS ESLNALSPSL RKSNDCPPTP KLRPPIVTEG HSSGTVASGD NLKATAEITN QGKCFKPSGL RRPTPYIGFF DAEKNNDQNI GQQVQPQHSK
501: IACLPGSPKS QSMNVNATPA AYGQQESKLT AAPHEESCAS KSKVVKPLPL MVEVEPFKVA EPACTNLTDP VVARPEAAQP QSMDIQHLLP ATPNSHPTFG
601: QQVLKPIAAP HEISACKSNT AKAPLEAMQP DVEAPLEALP MEVEPFKVDK PEACRHLSSP VVVKPNDKSF DQNAGGLLQQ QLVADPEACT RKTETVVDAD
701: YSKENIPALH QNIQPNVDAS SFVDLLTQKI PSISLGEATP NVAPRSCKE
101: DTEELAIVNS TFRKTQGSRL PGIMEEMRRS GESTTSTLEG ETWAMESLET ELFDNVRASI QRSLGKPDKV PGRPVAGSNT PKAIVNVPRV AAKKGVDRMA
201: QPKIRAPVST SQGAGGRQRP QATTKEPVAA RVNLPGVVEA KVSTKPPRAL PRVAMMRSST NTAIISGVSD KRSSTGGAVN RQAAGKTAST SAGQRSGGGT
301: NSTSISKSGP FTLATSSHGV TMDSKPDTKT KPATLSNKNR TAQRVPVRPA SKSGISKTIP SRSSGNKIPA KGHADRASPS ISPSSSMDSM SSVISGASTA
401: STVGRISHTS ESLNALSPSL RKSNDCPPTP KLRPPIVTEG HSSGTVASGD NLKATAEITN QGKCFKPSGL RRPTPYIGFF DAEKNNDQNI GQQVQPQHSK
501: IACLPGSPKS QSMNVNATPA AYGQQESKLT AAPHEESCAS KSKVVKPLPL MVEVEPFKVA EPACTNLTDP VVARPEAAQP QSMDIQHLLP ATPNSHPTFG
601: QQVLKPIAAP HEISACKSNT AKAPLEAMQP DVEAPLEALP MEVEPFKVDK PEACRHLSSP VVVKPNDKSF DQNAGGLLQQ QLVADPEACT RKTETVVDAD
701: YSKENIPALH QNIQPNVDAS SFVDLLTQKI PSISLGEATP NVAPRSCKE
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.