Factsheet for AT2G37070.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G53320.1	Thale cress	nucleus	42.08	40.33
Bra017208.1-P	Field mustard	nucleus	34.34	39.91
CDY18461	Canola	endoplasmic reticulum	32.45	39.81
GSMUA_Achr5P07300_001	Banana	cytosol	6.6	25.18
HORVU6Hr1G008700.1	Barley	cytosol	4.15	23.66
VIT_08s0040g02430.t01	Wine grape	nucleus	25.28	19.45
GSMUA_Achr10P...	Banana	cytosol	16.23	19.15
KRH67641	Soybean	nucleus	24.15	16.93
Os05t0121800-01	Rice	nucleus	19.06	16.48
KRG95926	Soybean	nucleus	22.64	16.46
HORVU2Hr1G101950.1	Barley	cytosol	6.6	14.77
Zm00001d021610_P003	Maize	cytosol	18.3	13.43
KXG36299	Sorghum	nucleus	18.68	13.22
Zm00001d006473_P001	Maize	cytosol	18.87	12.9
HORVU1Hr1G011900.6	Barley	nucleus	19.06	11.06
TraesCS1B01G076900.1	Wheat	nucleus	18.3	9.53
HORVU7Hr1G087000.5	Barley	plastid	6.79	8.98
PGSC0003DMT400004371	Potato	nucleus	21.7	8.85
TraesCS1D01G059700.2	Wheat	nucleus	19.06	8.78
TraesCS1A01G058600.1	Wheat	nucleus	19.62	8.7

Protein Annotations

MapMan:20.1.5.1.2	EntrezGene:818283	ProteinID:AEC09348.1	ArrayExpress:AT2G37070	EnsemblPlantsGene:AT2G37070	RefSeq:AT2G37070
TAIR:AT2G37070	RefSeq:AT2G37070-TAIR-G	EnsemblPlants:AT2G37070.1	TAIR:AT2G37070.1	Unigene:At.37470	UniProt:F4IPZ8
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005635	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017
GO:GO:0008150	GO:GO:0009524	GO:GO:0072686	RefSeq:NP_181244.4	PO:PO:0000084	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0007616	PO:PO:0009046	PO:PO:0025195	PO:PO:0025281
PANTHER:PTHR33737	PANTHER:PTHR33737:SF3	UniParc:UPI0001A7B02C	SEG:seg	:	:

Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT2G37070]

Coordinates

chr2:+:15578344..15581338

Molecular Weight (calculated)

57226.0 Da

IEP (calculated)

9.793

GRAVY (calculated)

-0.751

Length

530 amino acids

Sequence
(BLAST)

001: MGEEKENWRS ELDDINGLSL IDFSAEDDNL LLSSFLDPTT FDFSDTDKED RGLCLFGDTH NCCDEETLGS TTLEEKEPHK IMKTNLRKSL AWDKAFFTNA
101: GVLEPDELSS MMGRKSLPAV QEDLHRSTES MSTLKSDCTV ETGQEFFMCD AATPDKRKDL GSTEAVPSPT TSTLDDPSSE EKMKPNPIRK RPGIRSQGLA
201: KATKHPVASE EHNTSISRPS TGLNRPSSGL SKTKRASVDT NKAKQETNPK SSGGKEPLAS RVPISRRPRP IVSTPVVPFK SALRSSVASK NELTSSCSSI
301: ESCLSVSSTA SNKPSIHSVK QKKDQSLRIA SHSLANRPKS SAGSRNIDQL KVPPVSAGRT YKFNVSRLSS SVDWSSESPR AFTPNKMAKG NKKSVHGDNG
401: PPTDYTTQTL KPLNNSKDVS VVQDDPKPSA SMMKPTGLRV PSPKVGYFDG ARGSVARTPT GSCTGPVSGL SKHGACSPDE FTPSRTAKSQ PTMSKAAVRP
501: VSRSSRLIVS ASPKLTNKRY SKVSAEEQLG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.