Factsheet for Bra006990.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78168	Canola	nucleus	100.0	100.0
AT3G53320.1	Thale cress	nucleus	63.96	62.57
Bra017208.1-P	Field mustard	nucleus	27.17	32.24
GSMUA_Achr5P07300_001	Banana	cytosol	8.13	31.65
HORVU6Hr1G008700.1	Barley	cytosol	4.81	27.96
GSMUA_Achr10P...	Banana	cytosol	19.04	22.94
VIT_08s0040g02430.t01	Wine grape	nucleus	28.65	22.5
Os05t0121800-01	Rice	nucleus	22.92	20.23
KRG95926	Soybean	nucleus	25.32	18.79
KRH67641	Soybean	nucleus	26.06	18.65
HORVU2Hr1G101950.1	Barley	cytosol	7.95	18.14
Zm00001d021610_P003	Maize	cytosol	21.63	16.2
KXG36299	Sorghum	nucleus	22.37	16.15
Zm00001d006473_P001	Maize	cytosol	23.11	16.13
HORVU1Hr1G011900.6	Barley	nucleus	21.81	12.92
TraesCS1B01G076900.1	Wheat	nucleus	21.26	11.3
TraesCS1D01G059700.2	Wheat	nucleus	21.81	10.26
PGSC0003DMT400004371	Potato	nucleus	24.4	10.15
TraesCS1A01G058600.1	Wheat	nucleus	21.63	9.79
HORVU7Hr1G087000.5	Barley	plastid	6.28	8.48

Protein Annotations

MapMan:20.1.5.1.2	EnsemblPlantsGene:Bra006990	EnsemblPlants:Bra006990.1	EnsemblPlants:Bra006990.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635
GO:GO:0005737	GO:GO:0005856	GO:GO:0005875	GO:GO:0008017	GO:GO:0009524	GO:GO:0072686
UniProt:M4CRZ8	PANTHER:PTHR33737	PANTHER:PTHR33737:SF3	UniParc:UPI0002542F21	SEG:seg	:

Description

AT3G53320 (E=7e-165) | unknown protein

Coordinates

chrA09:-:26703654..26706360

Molecular Weight (calculated)

57677.1 Da

IEP (calculated)

9.764

GRAVY (calculated)

-0.742

Length

541 amino acids

Sequence
(BLAST)

001: MEDNENKKSE GEVEGLGLID VAAEDDSLLF SSFPNPTSYE FSEADEDEKC LNNEKDQTFL RETDHCNEEI LVSSVEEKED VLQPRESPEP QKVTKSGKYN
101: LRKSLAWDNA FFTSEGVLEP EEISSMMESN HKSERKGLPT IQEDVNRSTE SISTFQSDCT VENSQEFVLF EDVRASIQRS AKASDAPTPG IDNELVAIEV
201: ATSPTSSTVE VLASQEKMKP KASPKKLSIR ANGSGKATKQ PVSATRGLST SVAKPTPNRL GKARLLSTTS TSRASLDVNK TKLEKDSKLP AGKEPSVPRI
301: PISRRPTFPK PAVVKSTLRA SAASKNELTS SCSSLESCAS AASSSTSHKS ALNPIKKKND SSSRIANRST SRGIMGQPRI PPQPTKKTTK SNLSSAGSIS
401: DCSSESSRAS ATSQTAKNIQ KTVSGANDTV RSLKNSKDAS VVQAGAKEGT KRVSAINGGL VPPGSMKQSG LRVPTPKIGF FDGGRQGSSS SAGKKVGKSP
501: VQESSNSKTK AAGSRHVVSA SSPKLQNKLY SKINAEDQLE G

Best Arabidopsis Sequence Match ( AT3G53320.1 )
(BLAST)

001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG

Arabidopsis Description

At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.