CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15177	Soybean	cytosol	69.92	72.37
KRH34201	Soybean	nucleus	63.91	64.64
KRH34196	Soybean	cytosol	71.43	63.76
KRH05841	Soybean	cytosol, nucleus, peroxisome	49.62	61.68
KRG92590	Soybean	cytosol	50.0	47.0
KRG92586	Soybean	cytosol, plastid	50.0	43.89
KRH68844	Soybean	cytosol	46.62	39.12
KRH33867	Soybean	cytosol	38.72	39.02
KRH68481	Soybean	cytosol	22.18	37.34
KRH55667	Soybean	cytosol	36.47	36.74
KRH55669	Soybean	cytosol	36.09	36.36
KRH68480	Soybean	cytosol	38.72	35.89
KRG96762	Soybean	cytosol	38.72	35.89
KRH55670	Soybean	cytosol	13.16	35.71
KRH48244	Soybean	cytosol	24.44	23.13
KRH67813	Soybean	cytosol	24.81	22.37
KRH03980	Soybean	cytosol, plastid	23.68	22.03
KRH20009	Soybean	cytosol, plastid	24.44	21.81
KRH65151	Soybean	cytosol	22.93	21.71
KRH32630	Soybean	cytosol, plastid	24.44	21.67
KRG91447	Soybean	cytosol, plastid	22.56	20.48
KRH09123	Soybean	cytosol	22.18	20.42
KRH38594	Soybean	cytosol	22.18	20.42
KRH35368	Soybean	cytosol	22.18	19.8
KRH57251	Soybean	plastid	24.44	19.06

Protein Annotations

EMBL:ACUP02012763	EnsemblPlants:KRG92588	EnsemblPlantsGene:GLYMA_20G220200	EntrezGene:100794980	Gene3D:1.20.1280.50	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like
PANTHER:PTHR32278	PANTHER:PTHR32278:SF6	PFAM:PF00646	PFAM:PF14299	ProteinID:KRG92588	ProteinID:KRG92588.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI000296ED15	UniProt:K7N4Z4	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr20:-:45546488..45547836

Molecular Weight (calculated)

30238.0 Da

IEP (calculated)

5.401

GRAVY (calculated)

-0.220

Length

266 amino acids

Sequence
(BLAST)

001: MKFEDLAEGC MAKILSYTTR ADVCRLSLVS KAFHSAAEAN TVWDCFLPSD LSSIISPSSS VPPFRSIKDL YLYLSDRPTI IDQGIKSFQL EKRTGNKCYM
101: LSARDLSIIW GDTTHYWEWT TLPESSRFEE VARLRAVCWF DITGRMNTRV LSPNTNYAAF LVFKMIDAGG FHYDPAVLSV GILGGNSSTK NVCLDPNLVD
201: NRLDDRFHGL QRPTVRSDGW LEIEMGEFFN PGLEEDELQI KVSETTSNWW KRGFILEGIE VRPKHV

Best Arabidopsis Sequence Match ( AT1G80110.1 )
(BLAST)

001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP

Arabidopsis Description

PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.