CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55669	Soybean	cytosol	93.56	93.56
KRH55670	Soybean	cytosol	22.35	60.2
KRH33867	Soybean	cytosol	40.53	40.53
KRH34201	Soybean	nucleus	39.39	39.54
KRH15177	Soybean	cytosol	38.26	39.3
KRG92588	Soybean	cytosol	36.74	36.47
KRH68480	Soybean	cytosol	38.64	35.54
KRG96762	Soybean	cytosol	38.64	35.54
VIT_05s0051g00080.t01	Wine grape	cytosol	35.23	35.23
KRG92586	Soybean	cytosol, plastid	39.77	34.65
KRH68481	Soybean	cytosol	20.45	34.18
PGSC0003DMT400061566	Potato	cytosol	37.5	33.67
KRH05841	Soybean	cytosol, nucleus, peroxisome	27.27	33.64
KRH68844	Soybean	cytosol	39.39	32.81
PGSC0003DMT400027718	Potato	cytosol	37.12	32.67
Solyc11g006740.1.1	Tomato	cytosol	22.73	32.26
PGSC0003DMT400014139	Potato	cytosol	38.26	31.96
KRH34196	Soybean	cytosol	35.98	31.88
PGSC0003DMT400054296	Potato	cytosol	37.5	30.75
PGSC0003DMT400061562	Potato	cytosol	37.5	30.09
KRG92590	Soybean	cytosol	31.44	29.33
Solyc10g051160.1.1	Tomato	cytosol	29.92	29.26
PGSC0003DMT400097622	Potato	cytosol, mitochondrion	23.48	27.68
KRH03980	Soybean	cytosol, plastid	28.79	26.57
KRH67813	Soybean	cytosol	28.79	25.76
KRH20009	Soybean	cytosol, plastid	28.79	25.5
KRH32630	Soybean	cytosol, plastid	28.79	25.33
KRH48244	Soybean	cytosol	26.52	24.91
KRH09123	Soybean	cytosol	26.89	24.57
KRH65151	Soybean	cytosol	26.14	24.56
KRG91447	Soybean	cytosol, plastid	26.52	23.89
KRH38594	Soybean	cytosol	26.14	23.88
KRH35368	Soybean	cytosol	26.52	23.49
KRH57251	Soybean	plastid	28.79	22.29

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100793595	MapMan:35.1	EMBL:ACUP02004035	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_06G270800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1KEH9	InterPro:IPR001810
EnsemblPlants:KRH55667	ProteinID:KRH55667	ProteinID:KRH55667.1	PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like
PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000233959D

Description

hypothetical protein

Coordinates

chr6:+:46003037..46005138

Molecular Weight (calculated)

30207.7 Da

IEP (calculated)

4.393

GRAVY (calculated)

-0.241

Length

264 amino acids

Sequence
(BLAST)

001: MDTITKVLPE ECVATIISLT SPKDACQLSL VSPSFKEIAD SDAVWANFLP SDCEDIIDQS STPTLNLLSK KQIYAYLCDY HVLFDNGNMT LSLEKATGKK
101: CIIVSAKGFK ISWGDKPCYW YWESTPESRF SEVAMLKYLW WLEILGSLEA KFLSANTTYG VYFIFNFENH GSEFIYLNQN SQPRTYGDLV VCEGNINGYR
201: KRVCLDPPGE EVHEREDGWM EVEMGEFFSG DHEDNLVDFK LRDINSQLTH FLVVEGVEFR PKNM

Best Arabidopsis Sequence Match ( AT1G09155.1 )
(BLAST)

001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN

Arabidopsis Description

PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.