CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32630	Soybean	cytosol, plastid	86.44	85.0
KRH20009	Soybean	cytosol, plastid	85.42	84.56
VIT_08s0007g04190.t01	Wine grape	cytosol	81.36	80.27
AT3G53000.1	Thale cress	cytosol	73.56	72.33
CDX79690	Canola	cytosol	71.53	71.77
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	71.86	71.62
Bra023077.1-P	Field mustard	cytosol	71.19	71.43
CDX84551	Canola	cytosol	70.85	71.09
CDX73584	Canola	cytosol	68.47	69.66
PGSC0003DMT400006947	Potato	cytosol	70.51	69.57
PGSC0003DMT400072413	Potato	cytosol	68.47	69.18
PGSC0003DMT400028899	Potato	cytosol	68.47	68.71
Solyc09g008820.2.1	Tomato	cytosol	69.49	68.56
Bra006966.1-P	Field mustard	cytosol	69.83	68.44
CDX78140	Canola	cytosol	69.83	68.44
Solyc10g085490.1.1	Tomato	cytosol	68.81	67.89
Solyc10g083730.1.1	Tomato	cytosol	67.8	66.89
KRH65151	Soybean	cytosol	53.22	55.87
KRH03980	Soybean	cytosol, plastid	53.9	55.59
KRH48244	Soybean	cytosol	51.86	54.45
KRG91447	Soybean	cytosol, plastid	52.88	53.24
KRH35368	Soybean	cytosol	52.88	52.35
KRH09123	Soybean	cytosol	51.19	52.25
KRH38594	Soybean	cytosol	49.83	50.87
KRH57251	Soybean	plastid	53.56	46.33
KRH55670	Soybean	cytosol	9.83	29.59
KRH55667	Soybean	cytosol	25.76	28.79
KRH55669	Soybean	cytosol	24.41	27.27
KRH15177	Soybean	cytosol	23.39	26.85
KRH34201	Soybean	nucleus	23.05	25.86
KRH33867	Soybean	cytosol	22.71	25.38
KRG92588	Soybean	cytosol	22.37	24.81
KRG92586	Soybean	cytosol, plastid	25.08	24.42
KRH68481	Soybean	cytosol	12.88	24.05
KRH05841	Soybean	cytosol, nucleus, peroxisome	17.29	23.83
KRH34196	Soybean	cytosol	22.71	22.48
KRH68844	Soybean	cytosol	23.73	22.08
KRH68480	Soybean	cytosol	20.34	20.91
KRG96762	Soybean	cytosol	20.34	20.91
KRG92590	Soybean	cytosol	17.97	18.73

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100807328	MapMan:19.2.2.8.1.4.6	EMBL:ACUP02002082	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_03G189500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1JPV3	InterPro:IPR001810
EnsemblPlants:KRH67813	ProteinID:KRH67813	ProteinID:KRH67813.1	PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181
PANTHER:PTHR31960	PANTHER:PTHR31960:SF7	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000233949E	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:40038057..40042135

Molecular Weight (calculated)

33588.9 Da

IEP (calculated)

8.075

GRAVY (calculated)

-0.422

Length

295 amino acids

Sequence
(BLAST)

001: MGASLSNLGS NGSAAAPGLG DIPENCVARV FLHLTPPEIC NLARLNRAFR GAASADSVWQ TKLPRNYQDL LDLMPPERHR NLSKKDIFAL LSRAVPFDDG
101: NKEVWLDRVT GRVCMSISAK AMSITGIDDR RYWTWVPTEE SRFNTVAYLQ QIWWFEVDGE FSFPFPADIY TLSFRLHLGR FSKRLGRRVC SYEHTHGWDI
201: KPVRFELSTM DGQQASSECY LDETEPDDLH GNHKRGHWVD YKVGEFIVSG SEPTTKVRFS MKQIDCTHSK GGLCVDSVFI IPRDLRERKR SGILK

Best Arabidopsis Sequence Match ( AT3G53000.1 )
(BLAST)

001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA

Arabidopsis Description

PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.