CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15177	Soybean	cytosol	49.82	54.86
KRG92588	Soybean	cytosol	47.0	50.0
KRH05841	Soybean	cytosol, nucleus, peroxisome	35.69	47.2
KRH34201	Soybean	nucleus	41.34	44.49
KRH34196	Soybean	cytosol	45.94	43.62
KRH55670	Soybean	cytosol	12.37	35.71
KRH33867	Soybean	cytosol	32.51	34.85
KRG92586	Soybean	cytosol, plastid	36.75	34.32
KRH68481	Soybean	cytosol	18.37	32.91
KRH68844	Soybean	cytosol	36.4	32.49
KRH55667	Soybean	cytosol	29.33	31.44
KRH68480	Soybean	cytosol	31.8	31.36
KRG96762	Soybean	cytosol	30.04	29.62
KRH55669	Soybean	cytosol	27.56	29.55
KRH48244	Soybean	cytosol	21.2	21.35
KRH03980	Soybean	cytosol, plastid	21.55	21.33
KRH65151	Soybean	cytosol	19.79	19.93
KRH20009	Soybean	cytosol, plastid	20.49	19.46
KRH32630	Soybean	cytosol, plastid	20.49	19.33
KRG91447	Soybean	cytosol, plastid	19.79	19.11
KRH09123	Soybean	cytosol	19.08	18.69
KRH35368	Soybean	cytosol	19.43	18.46
KRH38594	Soybean	cytosol	18.73	18.34
KRH67813	Soybean	cytosol	18.73	17.97
KRH57251	Soybean	plastid	21.2	17.6

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EMBL:ACUP02012763	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_20G220300
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1NIK3	InterPro:IPR001810	EnsemblPlants:KRG92590
ProteinID:KRG92590	ProteinID:KRG92590.1	PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181
PANTHER:PTHR32278	PANTHER:PTHR32278:SF6	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI00029676EC	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:45548600..45549795

Molecular Weight (calculated)

32119.5 Da

IEP (calculated)

8.365

GRAVY (calculated)

-0.078

Length

283 amino acids

Sequence
(BLAST)

001: MGIFFSPYGK QESSGTTTIN LLPEGCISYI LSYTTPVDAC RLSLVSKAFR SAAQSDTLWD RFITSALSSL VSPSSFPSSH SKKHLYFALC DRPIIIHNGT
101: KSIQLDKRTG KRCYTLSTRV HLIDSEWGLA PLQWEHIRLP NSRFQQFGVL VSAPEAWFDI SGRIKALSLS PRTEYAAFLL FKMVYATPTE VHYHPWVLGY
201: LVITLPDSSS VRTIDVCLLK NLQQHSCVRR SDGWLEFELV GFFDLGLEDD QVQIIKVTDT RPNSNWKHGF ILEGIEIRPK HVY

Best Arabidopsis Sequence Match ( AT2G02240.1 )
(BLAST)

001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ

Arabidopsis Description

MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.