CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55667	Soybean	cytosol	60.2	22.35
KRH68481	Soybean	cytosol	34.69	21.52
KRH55669	Soybean	cytosol	55.1	20.45
KRH05841	Soybean	cytosol, nucleus, peroxisome	35.71	16.36
KRH33867	Soybean	cytosol	41.84	15.53
KRH34201	Soybean	nucleus	39.8	14.83
KRH15177	Soybean	cytosol	38.78	14.79
KRG92586	Soybean	cytosol, plastid	44.9	14.52
VIT_05s0051g00080.t01	Wine grape	cytosol	38.78	14.39
PGSC0003DMT400061566	Potato	cytosol	42.86	14.29
KRG96762	Soybean	cytosol	40.82	13.94
KRH68480	Soybean	cytosol	40.82	13.94
Solyc10g051160.1.1	Tomato	cytosol	36.73	13.33
KRH68844	Soybean	cytosol	42.86	13.25
KRG92588	Soybean	cytosol	35.71	13.16
PGSC0003DMT400054296	Potato	cytosol	42.86	13.04
PGSC0003DMT400027718	Potato	cytosol	39.8	13.0
PGSC0003DMT400061562	Potato	cytosol	41.84	12.46
KRG92590	Soybean	cytosol	35.71	12.37
PGSC0003DMT400014139	Potato	cytosol	38.78	12.03
KRH34196	Soybean	cytosol	34.69	11.41
KRG91447	Soybean	cytosol, plastid	29.59	9.9
KRH67813	Soybean	cytosol	29.59	9.83
KRH35368	Soybean	cytosol	29.59	9.73
KRH09123	Soybean	cytosol	28.57	9.69
KRH48244	Soybean	cytosol	27.55	9.61
KRH20009	Soybean	cytosol, plastid	28.57	9.4
KRH38594	Soybean	cytosol	27.55	9.34
KRH32630	Soybean	cytosol, plastid	28.57	9.33
KRH65151	Soybean	cytosol	26.53	9.25
KRH03980	Soybean	cytosol, plastid	26.53	9.09
PGSC0003DMT400097622	Potato	cytosol, mitochondrion	18.37	8.04
KRH57251	Soybean	plastid	25.51	7.33
Solyc11g006740.1.1	Tomato	cytosol	3.06	1.61

Protein Annotations

EMBL:ACUP02004035	EnsemblPlants:KRH55670	EnsemblPlantsGene:GLYMA_06G271100	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR32278	PANTHER:PTHR32278:SF15
PFAM:PF00646	PFscan:PS50181	ProteinID:KRH55670	ProteinID:KRH55670.1	SMART:SM00256	SUPFAM:SSF81383
UniParc:UPI0006EE0E52	UniProt:A0A0R0JM53	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:46083724..46084084

Molecular Weight (calculated)

11142.5 Da

IEP (calculated)

5.023

GRAVY (calculated)

0.069

Length

98 amino acids

Sequence
(BLAST)

1: MDITKVLPEE CISMIVSFTS PEDACRLSLV SPFFKEIADS DAVWENFLPS DYKDIIDQSS TPSLNLFSKK QIYSHLSVHH VLLVNGNMIM KLRLSHID

Best Arabidopsis Sequence Match ( AT5G24560.1 )
(BLAST)

001: MNFLDLPEEC IATMISFTSP FDACRISAVS KLLRSAADSN TTWERFLPSD YRMYIDNSLS RFSNKQLFLR FCESPLLIED GRTSFWMEKR SGKKCWMLSA
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL

Arabidopsis Description

AtPP2-B12phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.