CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH19580

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56250.1	KRH19580	AT5G44110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68480	Soybean	cytosol	65.91	60.63
KRG96762	Soybean	cytosol	65.53	60.28
VIT_14s0060g02020.t01	Wine grape	cytosol	58.71	54.39
VIT_14s0060g02000.t01	Wine grape	cytosol	56.06	51.39
GSMUA_Achr1P20450_001	Banana	plastid	47.35	48.45
GSMUA_Achr6P36620_001	Banana	cytosol	46.97	47.88
GSMUA_Achr1P05730_001	Banana	cytosol	47.35	46.82
Solyc01g100010.2.1	Tomato	cytosol	48.86	46.4
PGSC0003DMT400063744	Potato	cytosol	49.24	46.1
Bra030758.1-P	Field mustard	cytosol	47.35	45.96
CDY72024	Canola	plastid	47.35	45.96
Solyc01g100000.2.1	Tomato	cytosol	46.97	45.76
Bra018579.1-P	Field mustard	cytosol	48.11	45.68
CDY71953	Canola	cytosol	48.11	45.68
CDY31110	Canola	plastid	46.59	45.56
KRH68481	Soybean	cytosol	26.89	44.94
AT1G56250.1	Thale cress	cytosol	47.73	44.68
AT1G09155.1	Thale cress	cytosol	48.48	44.29
GSMUA_Achr1P05750_001	Banana	cytosol	46.21	44.2
AT1G56240.1	Thale cress	cytosol	47.35	44.01
CDX95006	Canola	cytosol	45.83	43.53
Bra038174.1-P	Field mustard	cytosol	46.59	43.46
CDY54100	Canola	cytosol	46.59	43.46
KRH34201	Soybean	nucleus	43.18	43.35
CDY38992	Canola	cytosol	46.21	43.11
KRH55670	Soybean	cytosol	15.53	41.84
KRH55667	Soybean	cytosol	40.53	40.53
GSMUA_Achr1P05720_001	Banana	cytosol	42.8	40.21
KRH15177	Soybean	cytosol	39.02	40.08
GSMUA_Achr5P10170_001	Banana	cytosol	23.86	39.38
KRG92586	Soybean	cytosol, plastid	45.08	39.27
KRH55669	Soybean	cytosol	39.02	39.02
TraesCS4B01G262300.1	Wheat	cytosol	39.02	39.02
TraesCS4D01G262300.1	Wheat	cytosol	39.02	38.87
KRG92588	Soybean	cytosol	39.02	38.72
GSMUA_Achr8P03670_001	Banana	nucleus	41.29	38.11
CDY62670	Canola	cytosol	4.17	37.93
EES05998	Sorghum	cytosol	39.39	37.41
TraesCS7A01G063600.1	Wheat	cytosol, nucleus, peroxisome	37.12	37.4
KRH68844	Soybean	cytosol	44.7	37.22
HORVU2Hr1G104500.6	Barley	cytosol	36.74	37.02
TraesCS5B01G558800.1	Wheat	nucleus	40.91	36.73
TraesCS6B01G423500.1	Wheat	cytosol	41.29	36.7
TraesCS3B01G018900.1	Wheat	cytosol	41.67	36.67
TraesCS6D01G369100.1	Wheat	cytosol	40.91	36.36
TraesCS4A01G320400.1	Wheat	cytosol	35.23	36.33
KXG28410	Sorghum	cytosol	37.12	36.3
TraesCS6D01G369200.1	Wheat	cytosol	40.53	36.27
TraesCS6A01G384000.2	Wheat	cytosol	40.53	36.03
TraesCS6A01G384100.1	Wheat	cytosol	40.53	36.03
EES05996	Sorghum	cytosol	37.88	35.84
Os02t0813350-01	Rice	cytosol	39.77	35.35
KXG31333	Sorghum	cytosol	40.53	35.2
TraesCS6B01G421100.1	Wheat	cytosol	42.05	35.13
Os02t0813166-00	Rice	cytosol, plastid	34.85	35.11
Os04t0280500-00	Rice	cytosol	20.08	35.1
Zm00001d018452_P001	Maize	cytosol, extracellular	40.15	35.1
Os02t0813083-00	Rice	extracellular	15.15	35.09
KXG31332	Sorghum	cytosol	40.53	35.08
KRH34196	Soybean	cytosol	39.39	34.9
TraesCS6B01G422300.1	Wheat	cytosol	39.02	34.8
TraesCS7D01G058100.1	Wheat	cytosol	34.47	34.73
TraesCS6A01G381900.1	Wheat	cytosol	41.29	34.49
TraesCS5D01G566000.2	Wheat	cytosol	40.53	34.41
TraesCS5B01G558600.1	Wheat	cytosol	35.61	34.31
Os12t0131400-01	Rice	nucleus	39.02	34.11
TraesCS6B01G423200.1	Wheat	cytosol	39.02	34.11
HORVU6Hr1G089430.1	Barley	cytosol, plastid	40.91	34.07
TraesCS6D01G366600.1	Wheat	cytosol	40.91	33.96
Os02t0813000-00	Rice	cytosol	29.55	33.91
TraesCS6B01G422400.1	Wheat	cytosol	38.26	33.89
TraesCS5B01G560100.1	Wheat	cytosol	40.15	33.87
TraesCS6D01G369000.1	Wheat	cytosol	40.15	33.87
TraesCS6B01G423400.1	Wheat	cytosol	40.15	33.76
GSMUA_Achr9P02770_001	Banana	nucleus	36.36	33.68
TraesCS6A01G383900.1	Wheat	cytosol	40.15	33.65
TraesCS7D01G518300.2	Wheat	cytosol	18.18	33.57
HORVU7Hr1G012610.1	Barley	cytosol	37.5	33.56
TraesCS6D01G368900.1	Wheat	cytosol	39.02	33.55
TraesCS5B01G560000.1	Wheat	cytosol	39.39	33.12
TraesCS7A01G530500.1	Wheat	extracellular	17.8	33.1
TraesCS7D01G351500.1	Wheat	cytosol	35.98	32.99
OQU85929	Sorghum	cytosol	35.61	32.98
Zm00001d051936_P001	Maize	cytosol	39.02	32.91
TraesCS6D01G368000.1	Wheat	cytosol	38.26	32.9
TraesCS7A01G371000.1	Wheat	cytosol	35.98	32.87
TraesCS4A01G319200.1	Wheat	cytosol	39.77	32.81
KRH05841	Soybean	cytosol, nucleus, peroxisome	26.52	32.71
KRG92590	Soybean	cytosol	34.85	32.51
TraesCS5B01G559800.1	Wheat	cytosol	37.12	32.45
TraesCS3B01G094500.1	Wheat	cytosol	37.5	32.35
TraesCS3D01G079700.1	Wheat	cytosol	36.36	32.32
HORVU6Hr1G090000.1	Barley	cytosol, plastid	41.29	32.25
EES05994	Sorghum	cytosol	40.91	31.95
TraesCS4A01G041300.1	Wheat	plastid	38.64	31.88
TraesCS3A01G079300.1	Wheat	cytosol	36.74	31.8
TraesCS7D01G300300.1	Wheat	cytosol	35.61	31.54
HORVU6Hr1G090010.2	Barley	cytosol, nucleus, plastid	40.53	31.47
HORVU7Hr1G072570.3	Barley	cytosol	34.85	31.29
Zm00001d032787_P001	Maize	cytosol	34.85	31.29
TraesCSU01G190600.1	Wheat	cytosol, mitochondrion	37.88	31.25
TraesCSU01G197600.1	Wheat	cytosol, mitochondrion	37.88	31.25
Zm00001d053172_P001	Maize	cytosol	34.85	31.08
TraesCS7A01G304800.1	Wheat	cytosol	34.85	30.98
TraesCS7B01G205100.1	Wheat	cytosol	34.85	30.98
HORVU3Hr1G014270.1	Barley	cytosol	36.36	30.77
Os08t0150700-01	Rice	cytosol	34.85	30.77
Os02t0812500-01	Rice	cytosol	38.64	30.72
TraesCS6D01G043900.1	Wheat	cytosol	34.85	30.67
TraesCS5D01G035000.1	Wheat	cytosol, mitochondrion	38.64	30.36
OQU85933	Sorghum	cytosol, mitochondrion	29.55	30.35
TraesCS3A01G082500.1	Wheat	plastid	23.86	30.0
HORVU6Hr1G089480.1	Barley	cytosol, extracellular	19.32	29.82
Zm00001d018451_P001	Maize	cytosol	38.64	29.65
Zm00001d024621_P001	Maize	cytosol	34.47	29.64
TraesCS7A01G063200.1	Wheat	cytosol	12.12	29.63
HORVU0Hr1G021610.3	Barley	cytosol	36.36	29.54
TraesCS3D01G083600.1	Wheat	cytosol	34.47	29.45
TraesCS6D01G367900.1	Wheat	cytosol	31.82	29.17
HORVU5Hr1G124090.2	Barley	cytosol	32.2	28.05
TraesCS7D01G519100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.58	27.92
TraesCS7B01G449100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.2	27.6
TraesCS3B01G097600.1	Wheat	cytosol	28.79	27.44
TraesCS7A01G531700.1	Wheat	cytosol	32.58	27.3
TraesCS7D01G518400.1	Wheat	cytosol	31.82	26.42
TraesCS7B01G448100.1	Wheat	cytosol, extracellular	31.06	26.03
Os12t0129700-01	Rice	cytosol	36.36	25.74
TraesCS6B01G422200.1	Wheat	mitochondrion	23.48	25.73
KRH48244	Soybean	cytosol	26.14	24.56
TraesCS7A01G530600.1	Wheat	cytosol, mitochondrion	30.68	23.62
OQU92610	Sorghum	mitochondrion	33.33	23.59
KRH65151	Soybean	cytosol	25.0	23.49
KRH03980	Soybean	cytosol, plastid	25.38	23.43
KRH67813	Soybean	cytosol	25.38	22.71
Os02t0812600-00	Rice	extracellular	38.64	22.37
KRH32630	Soybean	cytosol, plastid	25.38	22.33
KRG91447	Soybean	cytosol, plastid	24.62	22.18
KRH20009	Soybean	cytosol, plastid	25.0	22.15
KRH09123	Soybean	cytosol	24.24	22.15
KRH38594	Soybean	cytosol	24.24	22.15
KRH35368	Soybean	cytosol	24.62	21.81
CDX95004	Canola	peroxisome, plasma membrane, vacuole	23.86	19.5
KRH57251	Soybean	plastid	25.0	19.35
OQU85932	Sorghum	mitochondrion	35.23	16.58
TraesCS6D01G368100.1	Wheat	cytosol	33.33	15.71

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100794576	MapMan:35.1	EMBL:ACUP02006562	EMBL:BT095969	UniProt:C6TEE7
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_10G150400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	EnsemblPlants:KRH33867	ProteinID:KRH33867	ProteinID:KRH33867.1	PFAM:PF00646	PFAM:PF14299
InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF15	SMART:SM00256	SUPFAM:SSF81383
UniParc:UPI000189D89F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:38573748..38575248

Molecular Weight (calculated)

29929.9 Da

IEP (calculated)

5.213

GRAVY (calculated)

-0.231

Length

264 amino acids

Sequence
(BLAST)

001: MDTLPEDCVS KILSYTSPPD ACRFSMVSST LRSSADSDLL WRTFFPSDYS DIVSRALNPL SLNSSSSYKH LFYALCHPLL LDGGNMSFKL DKSSGKKSYI
101: LSARQLSITW SNDPLYWSWR PVPESRFKEV AELRTVSWLE IQGKIGTRIL TPNTSYVVYL IMKTSHREYG LDSVACEVSI AVDNKVKQSG RVYLCQNEKD
201: ENNLKKESIG IPMRREDGWM EIEMGEFFCG EADEEVLMSL MEVGYQLKGG LIVEGVEIRP KIIV

Best Arabidopsis Sequence Match ( AT1G09155.1 )
(BLAST)

001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN

Arabidopsis Description

PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.