Factsheet for TraesCSU01G190600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G197600.1	Wheat	cytosol, mitochondrion	100.0	100.0
HORVU7Hr1G012610.1	Barley	cytosol	75.62	82.03
TraesCS4B01G262300.1	Wheat	cytosol	62.5	75.76
TraesCS4D01G262300.1	Wheat	cytosol	62.5	75.47
TraesCS7A01G063600.1	Wheat	cytosol, nucleus, peroxisome	56.88	69.47
TraesCS7D01G058100.1	Wheat	cytosol	55.62	67.94
TraesCS4A01G041300.1	Wheat	plastid	65.62	65.62
TraesCS7A01G063200.1	Wheat	cytosol	21.56	63.89
Os02t0813350-01	Rice	cytosol	51.56	55.56
EES05996	Sorghum	cytosol	47.81	54.84
EES05998	Sorghum	cytosol	47.19	54.32
Zm00001d018452_P001	Maize	cytosol, extracellular	50.0	52.98
OQU85929	Sorghum	cytosol	46.25	51.93
Os02t0813166-00	Rice	cytosol, plastid	40.31	49.24
OQU85933	Sorghum	cytosol, mitochondrion	37.5	46.69
Os02t0813083-00	Rice	extracellular	16.25	45.61
GSMUA_Achr5P10170_001	Banana	cytosol	21.88	43.75
Bra035198.1-P	Field mustard	cytosol	33.12	41.41
CDX87293	Canola	cytosol	33.12	41.41
CDY39994	Canola	cytosol	32.81	41.02
AT1G80110.1	Thale cress	cytosol	30.62	38.13
VIT_14s0060g02020.t01	Wine grape	cytosol	33.75	37.89
KRH33867	Soybean	cytosol	31.25	37.88
VIT_14s0060g01990.t01	Wine grape	cytosol	32.19	37.18
VIT_14s0060g02000.t01	Wine grape	cytosol	32.81	36.46
PGSC0003DMT400063740	Potato	cytosol	32.19	35.89
Solyc01g099990.2.1	Tomato	cytosol	31.56	34.83
KRH68480	Soybean	cytosol	30.31	33.8
PGSC0003DMT400063744	Potato	cytosol	29.06	32.98
KRG96762	Soybean	cytosol	29.38	32.75
Solyc01g100010.2.1	Tomato	cytosol	28.12	32.37
Solyc01g100000.2.1	Tomato	cytosol	27.19	32.1
KRH68481	Soybean	cytosol	14.38	29.11

Protein Annotations

EnsemblPlants:TraesCSU01G190600.1	EnsemblPlantsGene:TraesCSU01G190600	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2
PFAM:PF00646	PFAM:PF14299	PFscan:PS50181	SEG:seg	SUPFAM:SSF81383	MapMan:35.1

Description

No Description!

Coordinates

chrUn:+:287416834..287418171

Molecular Weight (calculated)

35532.5 Da

IEP (calculated)

8.050

GRAVY (calculated)

-0.359

Length

320 amino acids

Sequence
(BLAST)

001: MPECNRCSTP TPRRLGHLVR NNLACFVTRT RPNHSVLRDS FHQIESRGPQ EGPMEPCEIA RLPEELLSVA LSRTSPRDAC RAAVVSPAFR AAADSDTVWS
101: CFLPPLDELP PLTDGEPCRK KDLFLRLSGR HVLLPGGLMS MWLDRETGAK CYMVSARALS IAWRDTPRYW NWVPLADSRF SETAVLRLVC WLDIPGKIDS
201: KILSKGSVYA AHIVYKLADS SYGLDSPIQE ASIRVGGTNL TRKVCLQPNP QRSMSQNRRA EDVVLPRQRG DGWMELELGD FTCDGDEDGD VSFGVSETKA
301: LNGKSGLVVQ GIEIRHKKSG

Best Arabidopsis Sequence Match ( AT1G80110.1 )
(BLAST)

001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP

Arabidopsis Description

PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.