Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 70.43 | 59.93 |
| EES05998 | Sorghum | cytosol | 63.42 | 58.63 |
| EES05996 | Sorghum | cytosol | 55.64 | 51.25 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 56.42 | 48.82 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 56.42 | 48.82 |
| OQU85929 | Sorghum | cytosol | 54.09 | 48.77 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 56.03 | 48.48 |
| Os02t0813350-01 | Rice | cytosol | 54.47 | 47.14 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 54.09 | 47.12 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 53.7 | 46.46 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 54.09 | 46.03 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 46.3 | 45.42 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 46.69 | 45.28 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 46.3 | 45.08 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 45.91 | 45.04 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 54.86 | 44.76 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 52.92 | 44.3 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 53.7 | 43.95 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 53.31 | 43.77 |
| Os02t0813166-00 | Rice | cytosol, plastid | 44.36 | 43.51 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 43.19 | 42.37 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 55.25 | 42.01 |
| KXG31332 | Sorghum | cytosol | 49.81 | 41.97 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 47.08 | 41.02 |
| KXG31333 | Sorghum | cytosol | 47.86 | 40.46 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 52.53 | 39.71 |
| KXG28410 | Sorghum | cytosol | 41.25 | 39.26 |
| TraesCS4A01G041300.1 | Wheat | plastid | 48.25 | 38.75 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 50.19 | 38.39 |
| TraesCSU01G190600.1 | Wheat | cytosol, mitochondrion | 46.69 | 37.5 |
| TraesCSU01G197600.1 | Wheat | cytosol, mitochondrion | 46.69 | 37.5 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 36.58 | 36.72 |
| Os02t0813083-00 | Rice | extracellular | 15.56 | 35.09 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 37.35 | 35.04 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 41.25 | 34.98 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 12.84 | 30.56 |
| AT1G80110.1 | Thale cress | cytosol | 30.35 | 30.35 |
| CDX87293 | Canola | cytosol | 29.96 | 30.08 |
| Bra035198.1-P | Field mustard | cytosol | 29.96 | 30.08 |
| CDY39994 | Canola | cytosol | 29.57 | 29.69 |
| KRH33867 | Soybean | cytosol | 30.35 | 29.55 |
| KRH68481 | Soybean | cytosol | 17.9 | 29.11 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.13 | 28.88 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 31.13 | 28.07 |
| EES05994 | Sorghum | cytosol | 35.41 | 26.92 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 16.73 | 26.88 |
| PGSC0003DMT400063740 | Potato | cytosol | 29.96 | 26.83 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 29.96 | 26.74 |
| Solyc01g099990.2.1 | Tomato | cytosol | 29.96 | 26.55 |
| KRH68480 | Soybean | cytosol | 29.18 | 26.13 |
| KRG96762 | Soybean | cytosol | 29.18 | 26.13 |
| Solyc01g100000.2.1 | Tomato | cytosol | 26.07 | 24.72 |
| PGSC0003DMT400063744 | Potato | cytosol | 26.46 | 24.11 |
| Solyc01g100010.2.1 | Tomato | cytosol | 25.68 | 23.74 |
| OQU92610 | Sorghum | mitochondrion | 29.96 | 20.64 |
| EER95641 | Sorghum | cytosol | 21.01 | 18.37 |
| EER99217 | Sorghum | cytosol | 21.01 | 18.06 |
| EER94629 | Sorghum | plasma membrane | 20.62 | 17.61 |
| EES11284 | Sorghum | cytosol | 19.07 | 15.65 |
| KXG31015 | Sorghum | cytosol | 18.29 | 15.61 |
| OQU85932 | Sorghum | mitochondrion | 33.85 | 15.51 |
Protein Annotations
| EnsemblPlants:OQU85933 | EnsemblPlantsGene:SORBI_3004G341100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF13 | PFAM:PF14299 |
| PFscan:PS50181 | ProteinID:OQU85933 | ProteinID:OQU85933.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI000B8BA810 |
| UniProt:A0A1Z5RQ87 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:67250499..67252496
Molecular Weight (calculated)
28227.9 Da
IEP (calculated)
7.148
GRAVY (calculated)
-0.381
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEQAEPLQ RIRQLPLARL LFVGDDALSR SQPRAQEEIP IPGAGEPTMD STAPAPATCE IARLPDDLLS ASLARTGPLD ACRAAAVSPA FRAAADADAV
101: WSSLLPRDLP PLADGELPDD PHSTKKQLFM RLSDSARPVL LADGLTSMWL DRATAAKCYM LSARKLCIIW GGTPQYWRWI PLTDSRPRVG RRNRRVPPGV
201: QVQRPQARAD GWMEMEMGEF KNEEGEDGEV SISLLETRGG NWKKGLILQG IEIRVKK
101: WSSLLPRDLP PLADGELPDD PHSTKKQLFM RLSDSARPVL LADGLTSMWL DRATAAKCYM LSARKLCIIW GGTPQYWRWI PLTDSRPRVG RRNRRVPPGV
201: QVQRPQARAD GWMEMEMGEF KNEEGEDGEV SISLLETRGG NWKKGLILQG IEIRVKK
001: MNFLDLPEEC IATMISFTSP FDACRISAVS KLLRSAADSN TTWERFLPSD YRMYIDNSLS RFSNKQLFLR FCESPLLIED GRTSFWMEKR SGKKCWMLSA
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
Arabidopsis Description
AtPP2-B12phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.