Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G197600.1 | Wheat | cytosol, mitochondrion | 82.03 | 75.62 |
| TraesCSU01G190600.1 | Wheat | cytosol, mitochondrion | 82.03 | 75.62 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 65.76 | 74.05 |
| Os02t0813350-01 | Rice | cytosol | 56.61 | 56.23 |
| EES05998 | Sorghum | cytosol | 51.19 | 54.32 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 54.92 | 53.64 |
| EES05996 | Sorghum | cytosol | 50.17 | 53.05 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 60.68 | 52.96 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 58.64 | 50.88 |
| OQU85929 | Sorghum | cytosol | 49.15 | 50.88 |
| Os02t0813166-00 | Rice | cytosol, plastid | 45.08 | 50.76 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 41.02 | 47.08 |
| Os02t0813083-00 | Rice | extracellular | 17.97 | 46.49 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 24.07 | 44.38 |
| Bra035198.1-P | Field mustard | cytosol | 35.93 | 41.41 |
| CDX87293 | Canola | cytosol | 35.93 | 41.41 |
| CDY39994 | Canola | cytosol | 35.59 | 41.02 |
| AT1G80110.1 | Thale cress | cytosol | 34.24 | 39.3 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 40.34 | 39.27 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 36.61 | 37.89 |
| KRH33867 | Soybean | cytosol | 33.56 | 37.5 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 39.32 | 36.59 |
| PGSC0003DMT400063740 | Potato | cytosol | 34.92 | 35.89 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 34.92 | 35.76 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 33.56 | 35.74 |
| Solyc01g099990.2.1 | Tomato | cytosol | 34.24 | 34.83 |
| KRH68480 | Soybean | cytosol | 32.88 | 33.8 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 33.56 | 33.67 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 34.92 | 33.01 |
| PGSC0003DMT400063744 | Potato | cytosol | 31.19 | 32.62 |
| Solyc01g100000.2.1 | Tomato | cytosol | 29.83 | 32.47 |
| KRG96762 | Soybean | cytosol | 31.53 | 32.4 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.83 | 31.65 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 18.31 | 31.58 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 33.22 | 30.15 |
| KRH68481 | Soybean | cytosol | 15.93 | 29.75 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 13.22 | 25.66 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 15.25 | 22.73 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 22.03 | 22.65 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 21.02 | 20.53 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 10.85 | 18.82 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 10.85 | 18.82 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 10.17 | 17.65 |
| HORVU4Hr1G040780.1 | Barley | mitochondrion, plastid | 7.46 | 17.6 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G012610.1 | EnsemblPlantsGene:HORVU7Hr1G012610 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF2 | PFAM:PF14299 | SEG:seg |
| SUPFAM:SSF81383 | UniParc:UPI000B48542F | UniProt:A0A287VIY5 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:17690987..17692849
Molecular Weight (calculated)
32124.3 Da
IEP (calculated)
5.770
GRAVY (calculated)
-0.345
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: DRQFPPNRVD RAGRGIMQEE PTEACEIARL PLELLSAALS LTSPRDACRA AAVSPDFRAA AGSDAVWACF LPPPDELPPI ADGEGGPPPP PRRMKDLFLR
101: LSGSHVLLPG GLMSMWLDRE TGAKCYMVPA RALSIAWRDT PRYWDWVPLA DSRFPESAVL RLVCWLDIPG KIDSKMLSKG SAYAAHIVYK LTDSSYGLDS
201: PVQEASISVG GTNLTRNVCL QPNQQRSTSQ NRRGGEHVVL PRQRADGWME LELGEFTCDG DEDGDVSFGL SETKALNGKS XLVVQGIEIR HKKSG
101: LSGSHVLLPG GLMSMWLDRE TGAKCYMVPA RALSIAWRDT PRYWDWVPLA DSRFPESAVL RLVCWLDIPG KIDSKMLSKG SAYAAHIVYK LTDSSYGLDS
201: PVQEASISVG GTNLTRNVCL QPNQQRSTSQ NRRGGEHVVL PRQRADGWME LELGEFTCDG DEDGDVSFGL SETKALNGKS XLVVQGIEIR HKKSG
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Arabidopsis Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.