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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003735.1-P
Bra008231.1-P
Bra015801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G80110.1 Bra003735.1-P AT1G75950.1 12795696
AT1G80110.1 Bra008231.1-P AT1G75950.1 12795696
AT1G80110.1 Bra015801.1-P AT1G75950.1 12795696
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87293 Canola cytosol 100.0 100.0
AT1G80110.1 Thale cress cytosol 77.34 77.04
GSMUA_Achr6P36620_001 Banana cytosol 47.27 46.72
GSMUA_Achr1P20450_001 Banana plastid 46.88 46.51
GSMUA_Achr1P05750_001 Banana cytosol 47.66 44.2
GSMUA_Achr1P05730_001 Banana cytosol 44.14 42.32
TraesCS4B01G262300.1 Wheat cytosol 42.58 41.29
TraesCS4D01G262300.1 Wheat cytosol 42.58 41.13
Os04t0280500-00 Rice cytosol 23.44 39.74
TraesCS6D01G369200.1 Wheat cytosol 45.7 39.66
TraesCS7A01G063600.1 Wheat cytosol, nucleus, peroxisome 39.84 38.93
HORVU2Hr1G104500.6 Barley cytosol 39.06 38.17
KXG28410 Sorghum cytosol 40.23 38.15
GSMUA_Achr1P05720_001 Banana cytosol 41.8 38.08
TraesCS6B01G423500.1 Wheat cytosol 44.14 38.05
TraesCS6D01G369100.1 Wheat cytosol 44.14 38.05
Os02t0813000-00 Rice cytosol 33.98 37.83
TraesCS6A01G384000.2 Wheat cytosol 43.75 37.71
TraesCS6A01G384100.1 Wheat cytosol 43.75 37.71
Os12t0131400-01 Rice nucleus 44.14 37.42
EES05998 Sorghum cytosol 40.62 37.41
EES05996 Sorghum cytosol 40.62 37.28
TraesCS6B01G422300.1 Wheat cytosol 42.58 36.82
TraesCS6B01G423200.1 Wheat cytosol 43.36 36.76
TraesCS4A01G320400.1 Wheat cytosol 36.72 36.72
GSMUA_Achr8P03670_001 Banana nucleus 41.02 36.71
Os02t0813350-01 Rice cytosol 42.58 36.7
OQU85929 Sorghum cytosol 40.62 36.49
TraesCS7D01G058100.1 Wheat cytosol 37.11 36.26
GSMUA_Achr5P10170_001 Banana cytosol 22.66 36.25
Bra024822.1-P Field mustard cytosol 30.86 36.24
HORVU7Hr1G012610.1 Barley cytosol 41.41 35.93
TraesCS6D01G368900.1 Wheat cytosol 42.97 35.83
TraesCS6D01G368000.1 Wheat cytosol 42.58 35.5
GSMUA_Achr9P02770_001 Banana nucleus 39.45 35.44
TraesCS7A01G530500.1 Wheat extracellular 19.53 35.21
KXG31333 Sorghum cytosol 41.8 35.2
Zm00001d018452_P001 Maize cytosol, extracellular 41.41 35.1
TraesCS7D01G518300.2 Wheat cytosol 19.53 34.97
Bra026608.1-P Field mustard cytosol 37.89 34.89
KXG31332 Sorghum cytosol 41.41 34.75
TraesCS6B01G423400.1 Wheat cytosol 42.58 34.71
HORVU6Hr1G089430.1 Barley cytosol, plastid 42.97 34.7
TraesCS5B01G558800.1 Wheat nucleus 39.84 34.69
TraesCS6A01G383900.1 Wheat cytosol 42.58 34.6
TraesCS6B01G422400.1 Wheat cytosol 40.23 34.56
TraesCS6D01G369000.1 Wheat cytosol 42.19 34.5
Os02t0813166-00 Rice cytosol, plastid 35.16 34.35
TraesCS6D01G366600.1 Wheat cytosol 42.58 34.28
Bra024823.1-P Field mustard cytosol 38.28 34.27
Os02t0813083-00 Rice extracellular 15.23 34.21
Bra030758.1-P Field mustard cytosol 36.33 34.19
TraesCS6B01G421100.1 Wheat cytosol 42.19 34.18
Bra018579.1-P Field mustard cytosol 37.11 34.17
TraesCS5B01G559800.1 Wheat cytosol 40.23 34.11
TraesCS3B01G018900.1 Wheat cytosol 39.84 34.0
TraesCS5B01G558600.1 Wheat cytosol 36.33 33.94
TraesCS6A01G381900.1 Wheat cytosol 41.8 33.86
Bra026604.1-P Field mustard cytosol 42.58 33.85
Bra024825.1-P Field mustard cytosol 37.89 33.8
Zm00001d053172_P001 Maize cytosol 39.06 33.78
HORVU6Hr1G090000.1 Barley cytosol, plastid 44.53 33.73
TraesCS5D01G035000.1 Wheat cytosol, mitochondrion 44.14 33.63
TraesCS5B01G560100.1 Wheat cytosol 41.02 33.55
TraesCS5D01G566000.2 Wheat cytosol 40.62 33.44
TraesCS4A01G041300.1 Wheat plastid 41.8 33.44
HORVU6Hr1G090010.2 Barley cytosol, nucleus, plastid 44.14 33.24
TraesCSU01G190600.1 Wheat cytosol, mitochondrion 41.41 33.12
TraesCSU01G197600.1 Wheat cytosol, mitochondrion 41.41 33.12
TraesCS4A01G319200.1 Wheat cytosol 41.02 32.81
HORVU7Hr1G072570.3 Barley cytosol 37.11 32.31
Zm00001d051936_P001 Maize cytosol 39.45 32.27
Os02t0812500-01 Rice cytosol 41.8 32.23
TraesCS7D01G300300.1 Wheat cytosol 37.5 32.21
TraesCS7A01G371000.1 Wheat cytosol 36.33 32.18
Bra026609.1-P Field mustard cytosol 41.8 32.04
TraesCS7B01G205100.1 Wheat cytosol 37.11 31.99
EES05994 Sorghum cytosol 42.19 31.95
TraesCS6D01G367900.1 Wheat cytosol 35.94 31.94
Os08t0150700-01 Rice cytosol 37.11 31.77
TraesCS7D01G351500.1 Wheat cytosol 35.55 31.6
Bra024827.1-P Field mustard cytosol 38.67 31.53
TraesCS5B01G560000.1 Wheat cytosol 38.67 31.53
TraesCS6D01G043900.1 Wheat cytosol 36.72 31.33
TraesCS3D01G079700.1 Wheat cytosol 36.33 31.31
TraesCS7A01G304800.1 Wheat cytosol 36.33 31.31
Bra038174.1-P Field mustard cytosol 34.38 31.1
HORVU5Hr1G124090.2 Barley cytosol 36.72 31.02
Bra026603.1-P Field mustard cytosol 35.16 30.93
TraesCS3D01G083600.1 Wheat cytosol 37.11 30.74
Os12t0129700-01 Rice cytosol 44.53 30.56
TraesCS7A01G063200.1 Wheat cytosol 12.89 30.56
TraesCS3B01G094500.1 Wheat cytosol 36.33 30.39
Zm00001d032787_P001 Maize cytosol 34.77 30.27
TraesCS3A01G079300.1 Wheat cytosol 35.94 30.16
OQU85933 Sorghum cytosol, mitochondrion 30.08 29.96
HORVU6Hr1G089480.1 Barley cytosol, extracellular 19.92 29.82
HORVU3Hr1G014270.1 Barley cytosol 36.33 29.81
Bra024824.1-P Field mustard cytosol 39.06 29.67
TraesCS3B01G097600.1 Wheat cytosol 32.03 29.6
TraesCS7D01G519100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.55 29.55
TraesCS7B01G449100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.16 29.22
Zm00001d018451_P001 Maize cytosol 39.06 29.07
Zm00001d024621_P001 Maize cytosol 34.77 28.99
TraesCS7A01G531700.1 Wheat cytosol 35.55 28.89
Bra026606.1-P Field mustard plasma membrane, vacuole 39.06 28.65
TraesCS3A01G082500.1 Wheat plastid 23.44 28.57
Bra026605.1-P Field mustard cytosol 28.91 28.35
TraesCS7D01G518400.1 Wheat cytosol 35.16 28.3
TraesCS6B01G422200.1 Wheat mitochondrion 26.56 28.22
TraesCS7B01G448100.1 Wheat cytosol, extracellular 33.2 26.98
HORVU0Hr1G021610.3 Barley cytosol 33.98 26.77
Os02t0812600-00 Rice extracellular 45.31 25.44
TraesCS7A01G530600.1 Wheat cytosol, mitochondrion 33.98 25.36
Bra006966.1-P Field mustard cytosol 26.17 22.26
Bra023077.1-P Field mustard cytosol 25.0 21.77
OQU92610 Sorghum mitochondrion 31.64 21.72
Bra014456.1-P Field mustard cytosol 23.83 21.33
Bra019781.1-P Field mustard cytosol 23.44 20.91
Bra027000.1-P Field mustard cytosol 23.44 20.69
Bra027618.1-P Field mustard cytosol 23.05 20.34
Bra029137.1-P Field mustard cytosol 21.48 18.97
TraesCS6D01G368100.1 Wheat cytosol 37.11 16.96
OQU85932 Sorghum mitochondrion 34.77 15.86
Protein Annotations
Gene3D:1.20.1280.50MapMan:35.1EnsemblPlantsGene:Bra035198EnsemblPlants:Bra035198.1EnsemblPlants:Bra035198.1-PInterPro:F-box-like_dom_sf
InterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634InterPro:IPR001810UniProt:M4F2A0PFAM:PF00646PFAM:PF14299
InterPro:PP2-likePFscan:PS50181PANTHER:PTHR32278SMART:SM00256SUPFAM:SSF81383UniParc:UPI0002541E9E
Description
AT1G80110 (E=2e-113) ATPP2-B11 | ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11); carbohydrate binding
Coordinates
chrA07:-:22544300..22545533
Molecular Weight (calculated)
29409.2 Da
IEP (calculated)
7.010
GRAVY (calculated)
-0.336
Length
256 amino acids
Sequence
(BLAST)
001: MNNLPEDCIA KILSLTSPRD VCRSSAVSRC FRSAADSDHV WNHFLPSEFP EDFRAPEGLP TKKHLFFSLV HNPLLLHGSQ LSFSLERSTG NKCYMMAARA
101: LNITWGHDQR YWQWISLPDA RFKEVAALKM VWWLDITGKI NISLLSDNTL YAAYLVFRWN LDPYGFRQPV EASLVLAGTE HDDVQPSMVS LMQNPGSEQG
201: QRAELRSDDW YEVQLGHFFK RRGDMGEIEM SLKETKRPFE KKGLIVHGIE IRPVLP
Best Arabidopsis Sequence Match ( AT1G80110.1 )
(BLAST)
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.