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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003735.1-P
Bra008231.1-P
Bra014519.1-P
Bra015801.1-P
Bra039504.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G52120.1 Bra003735.1-P AT1G75950.1 12795696
AT5G52120.1 Bra008231.1-P AT1G75950.1 12795696
AT5G52120.1 Bra015801.1-P AT1G75950.1 12795696
AT5G52120.1 Bra039504.1-P AT2G03160.1 12795696
AT5G52120.1 Bra039504.1-P AT2G03170.1 12795696
AT5G52120.1 Bra014519.1-P AT3G21850.1 12795696
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38901 Canola cytosol 95.17 99.28
CDY32595 Canola cytosol 97.59 97.92
AT5G52120.1 Thale cress cytosol 88.28 87.97
VIT_16s0100g00520.t01 Wine grape cytosol 54.48 56.63
KRH38594 Soybean cytosol 55.86 56.06
KRG91447 Soybean cytosol, plastid 56.21 55.63
KRH09123 Soybean cytosol 55.17 55.36
HORVU2Hr1G094960.4 Barley cytosol 37.59 55.05
KRH35368 Soybean cytosol 56.55 55.03
HORVU1Hr1G048690.1 Barley peroxisome 31.03 52.94
GSMUA_Achr1P03900_001 Banana cytosol 51.38 51.03
TraesCS5D01G319500.1 Wheat cytosol 49.66 50.17
TraesCS5B01G313700.1 Wheat cytosol 49.66 50.0
TraesCS5A01G312700.1 Wheat cytosol 49.31 49.83
HORVU5Hr1G080530.1 Barley cytosol 49.31 49.83
Bra014456.1-P Field mustard cytosol 48.97 49.65
Bra019781.1-P Field mustard cytosol 48.97 49.48
GSMUA_Achr4P27200_001 Banana cytosol 48.97 49.48
Os09t0525300-01 Rice cytosol 47.93 49.47
Solyc03g026160.2.1 Tomato cytosol, extracellular 25.86 49.34
GSMUA_Achr11P... Banana cytosol 48.62 49.3
Zm00001d029673_P001 Maize plasma membrane 50.0 48.99
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 50.34 48.67
Os02t0675800-01 Rice cytosol 49.66 48.48
TraesCS1A01G188700.1 Wheat plasma membrane 50.69 48.36
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 50.0 48.33
GSMUA_Achr3P12400_001 Banana cytosol 47.93 48.26
GSMUA_Achr5P03300_001 Banana cytosol 48.28 48.11
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 50.0 48.01
PGSC0003DMT400037131 Potato cytosol 48.97 47.97
EER94629 Sorghum plasma membrane 49.66 47.84
Zm00001d021224_P001 Maize cytosol 48.62 47.64
KXG31015 Sorghum cytosol 49.31 47.51
TraesCS2D01G397700.1 Wheat cytosol 48.62 47.32
Zm00001d051447_P002 Maize cytosol 48.28 47.3
GSMUA_Achr4P24870_001 Banana cytosol 49.31 47.19
Os03t0116700-01 Rice cytosol, extracellular 48.28 47.14
TraesCS2A01G400100.1 Wheat cytosol 48.28 46.98
GSMUA_Achr7P05860_001 Banana cytosol 46.9 46.9
TraesCS5A01G525700.1 Wheat cytosol 49.31 46.73
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 48.97 46.71
EER95641 Sorghum cytosol 47.24 46.6
TraesCS4D01G350000.1 Wheat cytosol 49.31 46.58
TraesCS4B01G356300.1 Wheat cytosol 49.31 46.58
Bra027000.1-P Field mustard cytosol 46.55 46.55
GSMUA_Achr11P... Banana cytosol 28.97 46.41
TraesCS6B01G269300.1 Wheat cytosol 47.59 46.31
Zm00001d027361_P001 Maize cytosol 47.59 46.31
Bra027618.1-P Field mustard cytosol 46.21 46.21
TraesCS6A01G256100.1 Wheat cytosol 47.24 45.97
TraesCS6D01G237300.1 Wheat cytosol 47.24 45.97
TraesCS2B01G418200.2 Wheat cytosol 47.93 45.87
EER99217 Sorghum cytosol 46.9 45.48
Bra006966.1-P Field mustard cytosol 46.21 44.52
EES11284 Sorghum cytosol 47.59 44.09
Bra023077.1-P Field mustard cytosol 44.48 43.88
Os10t0522400-01 Rice cytosol 24.14 42.42
Zm00001d026078_P001 Maize cytosol 41.38 41.52
HORVU4Hr1G086110.1 Barley cytosol 21.72 41.45
Zm00001d021854_P001 Maize cytosol 11.72 38.64
Zm00001d024256_P001 Maize cytosol, mitochondrion 30.0 34.94
HORVU5Hr1G055050.1 Barley mitochondrion 19.31 32.94
HORVU2Hr1G049730.1 Barley cytosol 19.31 32.94
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 25.86 31.65
Zm00001d035636_P001 Maize plastid 28.28 31.42
Bra024822.1-P Field mustard cytosol 22.07 29.36
Bra026608.1-P Field mustard cytosol 26.21 27.34
Bra024823.1-P Field mustard cytosol 26.55 26.92
Bra024827.1-P Field mustard cytosol 27.24 25.16
Bra026604.1-P Field mustard cytosol 26.9 24.22
Bra018579.1-P Field mustard cytosol 22.76 23.74
Bra030758.1-P Field mustard cytosol 22.07 23.53
Bra038174.1-P Field mustard cytosol 22.76 23.32
Bra026603.1-P Field mustard cytosol 23.1 23.02
Bra024825.1-P Field mustard cytosol 22.76 23.0
Bra026605.1-P Field mustard cytosol 20.0 22.22
Bra026606.1-P Field mustard plasma membrane, vacuole 26.21 21.78
Bra024824.1-P Field mustard cytosol 25.17 21.66
Bra035198.1-P Field mustard cytosol 18.97 21.48
Bra026609.1-P Field mustard cytosol 24.48 21.26
Protein Annotations
EnsemblPlants:Bra029137.1EnsemblPlants:Bra029137.1-PEnsemblPlantsGene:Bra029137GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:PP2-likePANTHER:PTHR31960PANTHER:PTHR31960:SF5PFAM:PF14299SEG:seg
SUPFAM:SSF81383UniParc:UPI000254007EUniProt:M4EK20MapMan:19.2.2.8.1.4.6::
Description
AT5G52120 (E=2e-146) AtPP2-A14 | AtPP2-A14 (Phloem protein 2-A14); carbohydrate binding
Coordinates
chrA03:+:6514268..6518008
Molecular Weight (calculated)
33316.1 Da
IEP (calculated)
8.603
GRAVY (calculated)
-0.347
Length
290 amino acids
Sequence
(BLAST)
001: MGAASSSLAG SEAYAGKLCG LEDVPENCIT AMFMCMEPPE ICILARVNKS FHRASRSDTV WEHKLPLNYK FLVRRILEDQ QVGEKDKVIS RTKEIYARLC
101: RPNFFDAGTK EAWLDKRSGK VCLAISPKAM KITGFDDRRY WERISSDESR FGSIAYLRQV WWLEAVGNIR FEFAPGKYSV LFKIHLGKPL RKCGRKTSNL
201: DQVHGWDIKP VRFQLSTSDG QGAMSERHLD EPGRWFYHHV GDFVVENQNS PVWVKFSMLQ IDCTHTKGGL CLDCVIICPF EFRGKYTYFD
Best Arabidopsis Sequence Match ( AT5G52120.1 )
(BLAST)
001: MGAASSSIVR SEPFAGKLCG LEDVPENCIT AMFMYMEPPE ICLLARVNKS FHRASRSDAV WEDKLPSNYK FLVRRILEDQ QQVGVKDKLI YRKKEIYARL
101: CRPNLFDTGT KEAWLDKRSG KVFLAISPKA MKITGIDDRR YWEHISSDES RFGSITYLRQ IWWLEAVGKI RFEFAPGKYS LLFKIQLGKP IRKCGRKTCS
201: LDQVHGWDIK PVRFQLSTSD GQCAMSERHL DESGRWVYHH AGDFVVENQN SPVWVKFSML QIDCTHTKGG LCLDCVIICP FEYRGKYKYS D
Arabidopsis Description
PP2A14F-box protein PP2-A14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ80]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.