Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0522400-01 | Rice | cytosol | 69.08 | 63.64 |
| Zm00001d021854_P001 | Maize | cytosol | 26.97 | 46.59 |
| HORVU4Hr1G040780.1 | Barley | mitochondrion, plastid | 38.16 | 46.4 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 50.66 | 45.29 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 50.0 | 44.71 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 69.08 | 34.77 |
| GSMUA_Achr4P27200_001 | Banana | cytosol | 55.26 | 29.27 |
| GSMUA_Achr1P03900_001 | Banana | cytosol | 53.29 | 27.74 |
| GSMUA_Achr5P03300_001 | Banana | cytosol | 52.63 | 27.49 |
| VIT_16s0100g00520.t01 | Wine grape | cytosol | 50.0 | 27.24 |
| GSMUA_Achr4P24870_001 | Banana | cytosol | 53.95 | 27.06 |
| VIT_15s0048g01930.t01 | Wine grape | cytosol | 50.66 | 26.64 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 49.34 | 26.13 |
| KRH48244 | Soybean | cytosol | 48.03 | 25.98 |
| KRH65151 | Soybean | cytosol | 48.03 | 25.98 |
| GSMUA_Achr11P... | Banana | cytosol | 48.03 | 25.52 |
| KRG91447 | Soybean | cytosol, plastid | 48.68 | 25.26 |
| KRH35368 | Soybean | cytosol | 48.68 | 24.83 |
| AT3G61060.2 | Thale cress | cytosol | 47.37 | 24.74 |
| Bra014456.1-P | Field mustard | cytosol | 45.39 | 24.13 |
| CDX89095 | Canola | cytosol | 45.39 | 24.13 |
| Solyc08g080360.2.1 | Tomato | plastid | 45.39 | 23.88 |
| CDY42484 | Canola | cytosol | 44.74 | 23.86 |
| VIT_02s0025g04380.t01 | Wine grape | cytosol | 48.03 | 23.62 |
| PGSC0003DMT400058590 | Potato | plastid | 44.74 | 23.53 |
| PGSC0003DMT400010881 | Potato | plastid | 44.74 | 23.53 |
| CDY57080 | Canola | cytosol | 43.42 | 23.4 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 44.08 | 23.18 |
| CDX98047 | Canola | cytosol | 43.42 | 23.0 |
| Bra019781.1-P | Field mustard | cytosol | 43.42 | 23.0 |
| KRH03980 | Soybean | cytosol, plastid | 42.76 | 22.73 |
| CDY38901 | Canola | cytosol | 41.45 | 22.66 |
| CDY32595 | Canola | cytosol | 42.76 | 22.49 |
| KRH09123 | Soybean | cytosol | 42.76 | 22.49 |
| KRH38594 | Soybean | cytosol | 42.76 | 22.49 |
| CDY45973 | Canola | cytosol | 42.76 | 22.41 |
| Bra027000.1-P | Field mustard | cytosol | 42.76 | 22.41 |
| CDY63226 | Canola | plastid | 42.76 | 22.41 |
| AT5G52120.1 | Thale cress | cytosol | 42.76 | 22.34 |
| Solyc10g017960.1.1 | Tomato | cytosol | 42.76 | 22.26 |
| Solyc01g091700.2.1 | Tomato | cytosol | 41.45 | 21.95 |
| PGSC0003DMT400071397 | Potato | cytosol | 41.45 | 21.88 |
| Bra029137.1-P | Field mustard | cytosol | 41.45 | 21.72 |
| PGSC0003DMT400026564 | Potato | cytosol | 42.11 | 21.69 |
| CDY47354 | Canola | cytosol | 40.79 | 21.38 |
| AT1G63090.1 | Thale cress | cytosol | 40.13 | 21.11 |
| Bra027618.1-P | Field mustard | cytosol | 40.13 | 21.03 |
| CDY49201 | Canola | cytosol | 40.13 | 21.03 |
| PGSC0003DMT400037131 | Potato | cytosol | 39.47 | 20.27 |
| KRH57251 | Soybean | plastid | 44.08 | 19.65 |
| AT1G12710.2 | Thale cress | cytosol | 42.76 | 19.52 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 22.37 | 17.17 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 31.58 | 16.33 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 17.11 | 15.29 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 26.32 | 15.27 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 30.26 | 14.74 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 30.26 | 14.15 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 25.66 | 13.22 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 27.63 | 12.35 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 26.97 | 12.13 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 25.0 | 11.99 |
| CDY16361 | Canola | extracellular | 15.13 | 11.98 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 21.71 | 10.89 |
| Solyc03g026160.2.1 | Tomato | cytosol, extracellular | 0.66 | 0.66 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G086110.1 | EnsemblPlantsGene:HORVU4Hr1G086110 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR31960 | PANTHER:PTHR31960:SF10 | SUPFAM:SSF81383 | UniParc:UPI000B47C32C | UniProt:A0A287PZ54 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr4H:+:633357885..633359293
Molecular Weight (calculated)
16540.9 Da
IEP (calculated)
8.473
GRAVY (calculated)
-0.232
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAGASDLAA PAEAPGSGLG DMPELCAAEV LLRLGAPDIC RLARLNRAFR SAAAADFVWE AKLPDNYGYL MGFVRGVAGE EDGERGRKRS AVGKKEVYAR
101: LAKAVRFDDG KREFWLEKTT GMVCMALSSK ALVITGIDDR RYWVHMPNTE SR
101: LAKAVRFDDG KREFWLEKTT GMVCMALSSK ALVITGIDDR RYWVHMPNTE SR
001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
Arabidopsis Description
AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.