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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 7
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400058590 Potato plastid 96.89 96.89
Solyc12g056410.1.1 Tomato cytosol, plastid 74.74 74.74
KRH03980 Soybean cytosol, plastid 64.71 65.38
HORVU1Hr1G048690.1 Barley peroxisome 38.06 64.71
CDY57080 Canola cytosol 62.63 64.18
VIT_02s0025g04380.t01 Wine grape cytosol 67.47 63.11
Bra019781.1-P Field mustard cytosol 62.63 63.07
CDX98047 Canola cytosol 62.28 62.72
HORVU2Hr1G094960.4 Barley cytosol 42.21 61.62
GSMUA_Achr4P27200_001 Banana cytosol 59.17 59.58
Solyc01g091700.2.1 Tomato cytosol 58.48 58.88
AT1G63090.1 Thale cress cytosol 58.13 58.13
GSMUA_Achr1P03900_001 Banana cytosol 58.48 57.88
Zm00001d029673_P001 Maize plasma membrane 59.17 57.77
GSMUA_Achr11P... Banana cytosol 57.09 57.69
CDY47354 Canola cytosol 57.79 57.59
EER94629 Sorghum plasma membrane 59.86 57.48
GSMUA_Achr5P03300_001 Banana cytosol 57.79 57.39
Bra027618.1-P Field mustard cytosol 57.44 57.24
CDY49201 Canola cytosol 57.44 57.24
EER95641 Sorghum cytosol 58.13 57.14
Os03t0116700-01 Rice cytosol, extracellular 58.48 56.9
Bra027000.1-P Field mustard cytosol 57.09 56.9
Os02t0675800-01 Rice cytosol 58.13 56.57
CDY63226 Canola plastid 56.75 56.55
CDY45973 Canola cytosol 56.75 56.55
Os09t0525300-01 Rice cytosol 54.67 56.23
GSMUA_Achr4P24870_001 Banana cytosol 58.82 56.11
Zm00001d027361_P001 Maize cytosol 57.79 56.04
TraesCS6D01G237300.1 Wheat cytosol 57.79 56.04
TraesCS6A01G256100.1 Wheat cytosol 57.79 56.04
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 58.13 56.0
CDY16361 Canola extracellular 37.02 55.73
TraesCS2A01G400100.1 Wheat cytosol 57.44 55.7
TraesCS2D01G397700.1 Wheat cytosol 57.44 55.7
TraesCS6B01G269300.1 Wheat cytosol 57.44 55.7
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 57.79 55.67
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 57.79 55.3
TraesCS5D01G319500.1 Wheat cytosol 54.67 55.05
TraesCS1A01G188700.1 Wheat plasma membrane 57.79 54.93
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 57.79 54.93
Solyc10g017960.1.1 Tomato cytosol 55.36 54.79
TraesCS2B01G418200.2 Wheat cytosol 57.44 54.79
TraesCS5A01G312700.1 Wheat cytosol 54.33 54.7
HORVU5Hr1G080530.1 Barley cytosol 54.33 54.7
TraesCS5B01G313700.1 Wheat cytosol 54.33 54.51
GSMUA_Achr3P12400_001 Banana cytosol 54.33 54.51
KRH57251 Soybean plastid 64.01 54.25
KXG31015 Sorghum cytosol 56.4 54.15
GSMUA_Achr7P05860_001 Banana cytosol 54.33 54.14
Zm00001d051447_P002 Maize cytosol 55.36 54.05
Zm00001d021224_P001 Maize cytosol 55.36 54.05
Solyc03g026160.2.1 Tomato cytosol, extracellular 28.37 53.95
EER99217 Sorghum cytosol 55.36 53.51
AT1G12710.2 Thale cress cytosol 60.9 52.85
GSMUA_Achr11P... Banana cytosol 32.53 51.93
TraesCS4B01G356300.1 Wheat cytosol 55.02 51.79
TraesCS4D01G350000.1 Wheat cytosol 54.33 51.14
TraesCS5A01G525700.1 Wheat cytosol 53.98 50.98
EES11284 Sorghum cytosol 55.02 50.8
Solyc10g083730.1.1 Tomato cytosol 50.52 48.83
Solyc10g085490.1.1 Tomato cytosol 49.83 48.16
Os10t0522400-01 Rice cytosol 27.34 47.88
Zm00001d026078_P001 Maize cytosol 47.4 47.4
Solyc09g008820.2.1 Tomato cytosol 47.75 46.15
HORVU4Hr1G086110.1 Barley cytosol 23.88 45.39
Zm00001d024256_P001 Maize cytosol, mitochondrion 36.33 42.17
Zm00001d021854_P001 Maize cytosol 12.11 39.77
Zm00001d035636_P001 Maize plastid 33.91 37.55
HORVU2Hr1G049730.1 Barley cytosol 21.11 35.88
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 28.72 35.02
HORVU5Hr1G055050.1 Barley mitochondrion 20.42 34.71
Solyc12g044930.1.1 Tomato cytosol 23.18 25.57
Solyc12g098200.1.1 Tomato cytosol, endoplasmic reticulum, extracellular 23.53 25.56
Solyc12g098190.1.1 Tomato cytosol 22.49 24.9
Solyc05g055870.2.1 Tomato cytosol 26.3 24.68
Solyc01g100000.2.1 Tomato cytosol 22.84 24.35
Solyc04g050990.2.1 Tomato cytosol 24.91 24.24
Solyc01g100010.2.1 Tomato cytosol 23.18 24.1
Solyc01g099990.2.1 Tomato cytosol 23.88 23.79
Solyc11g006740.1.1 Tomato cytosol 15.22 23.66
Solyc04g056680.1.1 Tomato cytosol 12.8 20.79
Solyc10g051160.1.1 Tomato cytosol 19.03 20.37
Solyc12g096890.1.1 Tomato cytosol 10.73 19.38
Solyc05g053620.2.1 Tomato cytosol 9.69 16.97
Protein Annotations
EnsemblPlants:Solyc08g080360.2.1EnsemblPlantsGene:Solyc08g080360.2GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:F-box-like_dom_sf
InterPro:F-box_domInterPro:IPR001810InterPro:PP2-likePANTHER:PTHR31960PANTHER:PTHR31960:SF2PFAM:PF14299
PFscan:PS50181SUPFAM:SSF81383UniParc:UPI000276B8D3UniProt:K4CP36MapMan:19.2.2.8.1.4.6:
Description
No Description!
Coordinates
chr8:-:63663883..63666252
Molecular Weight (calculated)
32811.2 Da
IEP (calculated)
8.684
GRAVY (calculated)
-0.242
Length
289 amino acids
Sequence
(BLAST)
001: MGSSFSVLIP QFSSTVTQQT HPSLGDLPES CVASVLVYMD PPQICKLSML NRAFRGASSA DFVWESKLPM NYTSIIQRVF AGRNFPANLC KRDIYAKLCR
101: PNSFDGGSKK VWLDKKTGRV CMSISSSGLV ITGIDDRRYW SRIETDESRF KSVAYLQQIW WFEVDGEVDF PFPVGSYSIF FRLQVGRASW RFGRRVCNSE
201: HVHGWDRKPV RFQLSTSDGQ QATTQCYLNE PGIWKYHHVG DFVATGSVEP MKVKYSLTQI DCTHTKGGLC VDSVLICPVE FTERLKQSF
Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)
001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
Arabidopsis Description
AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.