Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49201 | Canola | cytosol | 82.7 | 82.41 |
| CDY47354 | Canola | cytosol | 82.7 | 82.41 |
| Bra027618.1-P | Field mustard | cytosol | 82.7 | 82.41 |
| Bra027000.1-P | Field mustard | cytosol | 81.31 | 81.03 |
| CDY16361 | Canola | extracellular | 53.63 | 80.73 |
| CDY63226 | Canola | plastid | 80.97 | 80.69 |
| CDY45973 | Canola | cytosol | 80.62 | 80.34 |
| AT1G12710.2 | Thale cress | cytosol | 74.74 | 64.86 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 37.72 | 64.12 |
| KRH03980 | Soybean | cytosol, plastid | 59.52 | 60.14 |
| PGSC0003DMT400058590 | Potato | plastid | 58.48 | 58.48 |
| Solyc08g080360.2.1 | Tomato | plastid | 58.13 | 58.13 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 39.79 | 58.08 |
| VIT_02s0025g04380.t01 | Wine grape | cytosol | 61.25 | 57.28 |
| PGSC0003DMT400010881 | Potato | plastid | 56.06 | 56.06 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 55.71 | 55.71 |
| AT3G61060.2 | Thale cress | cytosol | 54.33 | 53.95 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 55.36 | 52.98 |
| GSMUA_Achr4P27200_001 | Banana | cytosol | 52.6 | 52.96 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 54.67 | 52.67 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 54.33 | 52.33 |
| GSMUA_Achr4P24870_001 | Banana | cytosol | 54.67 | 52.15 |
| Zm00001d029673_P001 | Maize | plasma membrane | 53.29 | 52.03 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 54.67 | 51.97 |
| GSMUA_Achr11P... | Banana | cytosol | 50.87 | 51.4 |
| GSMUA_Achr1P03900_001 | Banana | cytosol | 51.9 | 51.37 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 52.94 | 51.34 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 52.94 | 51.34 |
| KRH57251 | Soybean | plastid | 60.55 | 51.32 |
| Os09t0525300-01 | Rice | cytosol | 49.83 | 51.25 |
| Os02t0675800-01 | Rice | cytosol | 52.6 | 51.18 |
| Os03t0116700-01 | Rice | cytosol, extracellular | 52.6 | 51.18 |
| EER94629 | Sorghum | plasma membrane | 53.29 | 51.16 |
| Zm00001d027361_P001 | Maize | cytosol | 52.6 | 51.01 |
| GSMUA_Achr5P03300_001 | Banana | cytosol | 51.21 | 50.86 |
| EER95641 | Sorghum | cytosol | 51.56 | 50.68 |
| Os04t0571300-01 | Rice | cytosol, mitochondrion, peroxisome | 52.94 | 50.33 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 52.6 | 50.16 |
| Zm00001d021224_P001 | Maize | cytosol | 51.21 | 50.0 |
| EER99217 | Sorghum | cytosol | 51.56 | 49.83 |
| GSMUA_Achr7P05860_001 | Banana | cytosol | 49.83 | 49.66 |
| GSMUA_Achr3P12400_001 | Banana | cytosol | 49.13 | 49.31 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 49.13 | 49.31 |
| KXG31015 | Sorghum | cytosol | 50.87 | 48.84 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 48.44 | 48.78 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 48.44 | 48.78 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 51.56 | 48.53 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 48.1 | 48.43 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 49.83 | 48.32 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 49.83 | 48.32 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 49.83 | 48.32 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 50.87 | 47.88 |
| AT3G53000.1 | Thale cress | cytosol | 49.48 | 47.67 |
| Zm00001d051447_P002 | Maize | cytosol | 48.79 | 47.64 |
| AT5G52120.1 | Thale cress | cytosol | 47.4 | 47.08 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 49.83 | 47.06 |
| EES11284 | Sorghum | cytosol | 50.17 | 46.33 |
| GSMUA_Achr11P... | Banana | cytosol | 28.03 | 44.75 |
| Zm00001d026078_P001 | Maize | cytosol | 41.87 | 41.87 |
| Os10t0522400-01 | Rice | cytosol | 23.88 | 41.82 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 21.11 | 40.13 |
| Zm00001d024256_P001 | Maize | cytosol, mitochondrion | 32.87 | 38.15 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 29.41 | 35.87 |
| Zm00001d021854_P001 | Maize | cytosol | 10.73 | 35.23 |
| Zm00001d035636_P001 | Maize | plastid | 31.49 | 34.87 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 17.65 | 30.0 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 17.3 | 29.41 |
| AT2G02360.1 | Thale cress | nucleus | 22.84 | 24.26 |
| AT1G80110.1 | Thale cress | cytosol | 21.11 | 23.74 |
| AT2G02300.1 | Thale cress | cytosol | 22.49 | 22.89 |
| AT1G09155.1 | Thale cress | cytosol | 22.84 | 22.84 |
| AT5G24560.1 | Thale cress | cytosol | 15.22 | 22.56 |
| AT1G56240.1 | Thale cress | cytosol | 22.15 | 22.54 |
| AT1G56250.1 | Thale cress | cytosol | 21.8 | 22.34 |
| AT2G02240.1 | Thale cress | cytosol | 23.88 | 21.56 |
| AT2G02340.1 | Thale cress | cytosol | 22.49 | 21.31 |
| AT2G02310.1 | Thale cress | cytosol | 22.15 | 20.85 |
| AT2G02250.1 | Thale cress | cytosol | 21.8 | 20.32 |
| AT2G02230.1 | Thale cress | cytosol | 22.84 | 19.64 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 19.72 | 19.39 |
| AT2G02320.1 | Thale cress | mitochondrion | 20.42 | 19.22 |
Protein Annotations
| MapMan:19.2.2.8.1.4.6 | EntrezGene:842612 | UniProt:A0A178W4F1 | ProteinID:AAG51598.1 | ProteinID:AEE34052.1 | EMBL:AK228787 |
| ArrayExpress:AT1G63090 | EnsemblPlantsGene:AT1G63090 | RefSeq:AT1G63090 | TAIR:AT1G63090 | RefSeq:AT1G63090-TAIR-G | EnsemblPlants:AT1G63090.1 |
| TAIR:AT1G63090.1 | Symbol:AtPP2-A11 | EMBL:BT002971 | EMBL:BT024709 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR001810 | RefSeq:NP_176497.1 | ProteinID:OAP11992.1 | PFAM:PF00646 |
| PFAM:PF14299 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2-like |
| PANTHER:PTHR31960 | PANTHER:PTHR31960:SF2 | UniProt:Q9CAN4 | SUPFAM:SSF81383 | UniParc:UPI00000A8477 | SEG:seg |
Description
PP2A11F-box protein PP2-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN4]
Coordinates
chr1:-:23390968..23392873
Molecular Weight (calculated)
32556.7 Da
IEP (calculated)
7.949
GRAVY (calculated)
-0.291
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGFSLFQK NLSSCYGDRD LLQPGLGDLP ESCVALILQN LDPVEICRFS KLNTAFHGAS WADFVWESKL PPDYKLILEK ILGSFPDNLR KRDIFTFLSR
101: VNSFDEGNKK AWVDKRTGGL CLCTSAKGLS ITGIDDRRYW SHIPSDDSRF ASVAYVQQIW WFQVDGEIDF PFPAGTYSVY FRLQLGKPGK RFGWKVVDTE
201: QVHGWNIKPV RFQLSTEDGQ HSSSQCMLTE AGNWSHYHAG DFVVGKSKSS STKIKFSMTQ IDCTHTKGGL CVDSVVVYPS SCKDRLMQI
101: VNSFDEGNKK AWVDKRTGGL CLCTSAKGLS ITGIDDRRYW SHIPSDDSRF ASVAYVQQIW WFQVDGEIDF PFPAGTYSVY FRLQLGKPGK RFGWKVVDTE
201: QVHGWNIKPV RFQLSTEDGQ HSSSQCMLTE AGNWSHYHAG DFVVGKSKSS STKIKFSMTQ IDCTHTKGGL CVDSVVVYPS SCKDRLMQI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.