Factsheet for AT2G02340.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G02320.1	Thale cress	mitochondrion	66.23	65.8
AT2G02360.1	Thale cress	nucleus	57.38	64.34
Bra024822.1-P	Field mustard	cytosol	43.61	61.01
CDY17599	Canola	cytosol	56.07	60.42
CDY03057	Canola	cytosol	45.9	59.07
CDY03056	Canola	cytosol	29.84	57.96
AT2G02350.2	Thale cress	cytosol, mitochondrion	53.77	55.78
AT2G02240.1	Thale cress	cytosol	52.13	49.69
AT2G02250.1	Thale cress	cytosol	49.51	48.71
AT2G02300.1	Thale cress	cytosol	40.33	43.31
AT2G02310.1	Thale cress	cytosol	42.62	42.35
AT5G24560.1	Thale cress	cytosol	26.23	41.03
VIT_00s0214g00130.t01	Wine grape	cytosol	36.39	40.07
KRG92586	Soybean	cytosol, plastid	39.67	39.93
KRH68844	Soybean	cytosol	40.33	38.8
PGSC0003DMT400031292	Potato	cytosol	37.7	38.72
Solyc04g050990.2.1	Tomato	cytosol	37.7	38.72
AT2G02230.1	Thale cress	cytosol	42.3	38.39
VIT_00s0214g00060.t01	Wine grape	cytosol	35.74	37.98
AT1G80110.1	Thale cress	cytosol	31.8	37.74
Solyc05g055870.2.1	Tomato	cytosol	36.39	36.04
PGSC0003DMT400060018	Potato	cytosol	36.72	35.78
VIT_00s0214g00150.t01	Wine grape	cytosol	35.74	35.62
AT1G56240.1	Thale cress	cytosol	32.46	34.86
AT1G56250.1	Thale cress	cytosol	32.13	34.75
VIT_00s0214g00090.t01	Wine grape	cytosol	38.36	34.72
AT1G09155.1	Thale cress	cytosol	32.13	33.91
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	38.36	33.52
AT3G53000.1	Thale cress	cytosol	24.59	25.0
AT3G61060.2	Thale cress	cytosol	23.28	24.4
AT1G63090.1	Thale cress	cytosol	21.31	22.49
AT5G52120.1	Thale cress	cytosol	21.31	22.34
AT1G12710.2	Thale cress	cytosol	22.62	20.72

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EntrezGene:814765	ProteinID:AAC78516.1	ProteinID:AEC05567.1	ArrayExpress:AT2G02340
EnsemblPlantsGene:AT2G02340	RefSeq:AT2G02340	TAIR:AT2G02340	RefSeq:AT2G02340-TAIR-G	EnsemblPlants:AT2G02340.1	TAIR:AT2G02340.1
Unigene:At.52599	Symbol:AtPP2-B8	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0030246	InterPro:IPR001810	RefSeq:NP_178339.1	PFAM:PF00646	PFAM:PF14299
PO:PO:0009047	InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF6	UniProt:Q9ZVQ8
SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI00000A1FCF	SEG:seg	:	:

Description

PP2B8Putative F-box protein PP2-B8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ8]

Coordinates

chr2:-:616088..617322

Molecular Weight (calculated)

35240.7 Da

IEP (calculated)

8.622

GRAVY (calculated)

-0.297

Length

305 amino acids

Sequence
(BLAST)

001: MTKTRCMHEH FRKIVQRVKK TLRLSASDKS HGVAELDDLP EECVSIIVSF TSPQDACVLA SVSKTFASAV KSDIVWEKFI PPEYESLISQ SRAFKFLSKK
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.