Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G02310.1 | Thale cress | cytosol | 55.99 | 51.79 |
| AT2G02360.1 | Thale cress | nucleus | 47.54 | 49.63 |
| Bra026605.1-P | Field mustard | cytosol | 44.01 | 47.89 |
| AT2G02250.1 | Thale cress | cytosol | 49.65 | 45.48 |
| AT2G02240.1 | Thale cress | cytosol | 48.94 | 43.44 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 44.01 | 42.52 |
| AT2G02340.1 | Thale cress | cytosol | 43.31 | 40.33 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 39.08 | 40.07 |
| AT5G24560.1 | Thale cress | cytosol | 26.41 | 38.46 |
| AT2G02320.1 | Thale cress | mitochondrion | 40.85 | 37.78 |
| Solyc04g050990.2.1 | Tomato | cytosol | 38.73 | 37.04 |
| PGSC0003DMT400031292 | Potato | cytosol | 38.03 | 36.36 |
| AT2G02230.1 | Thale cress | cytosol | 41.9 | 35.42 |
| Solyc05g055870.2.1 | Tomato | cytosol | 38.03 | 35.06 |
| PGSC0003DMT400060018 | Potato | cytosol | 38.38 | 34.82 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 37.32 | 34.64 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 33.8 | 33.45 |
| KRG92586 | Soybean | cytosol, plastid | 35.56 | 33.33 |
| AT1G80110.1 | Thale cress | cytosol | 29.93 | 33.07 |
| AT1G56250.1 | Thale cress | cytosol | 31.69 | 31.91 |
| KRH68844 | Soybean | cytosol | 35.56 | 31.86 |
| AT1G56240.1 | Thale cress | cytosol | 30.99 | 30.99 |
| AT1G09155.1 | Thale cress | cytosol | 30.99 | 30.45 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 36.62 | 29.8 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 35.21 | 29.67 |
| AT5G52120.1 | Thale cress | cytosol | 23.24 | 22.68 |
| AT3G53000.1 | Thale cress | cytosol | 23.94 | 22.67 |
| AT1G63090.1 | Thale cress | cytosol | 22.89 | 22.49 |
| AT3G61060.2 | Thale cress | cytosol | 22.18 | 21.65 |
| AT1G12710.2 | Thale cress | cytosol | 22.89 | 19.52 |
Protein Annotations
| MapMan:35.1 | EntrezGene:814761 | ProteinID:AAC78513.1 | ProteinID:AEC05564.1 | ArrayExpress:AT2G02300 | EnsemblPlantsGene:AT2G02300 |
| RefSeq:AT2G02300 | TAIR:AT2G02300 | RefSeq:AT2G02300-TAIR-G | EnsemblPlants:AT2G02300.1 | TAIR:AT2G02300.1 | EMBL:AY219138 |
| Unigene:At.41504 | Symbol:AtPP2-B5 | EMBL:BT026045 | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0030246 | RefSeq:NP_178336.1 | PFAM:PF14299 | PO:PO:0007616 | PO:PO:0009030 |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | UniProt:Q9ZVR1 | SUPFAM:SSF81383 | UniParc:UPI00000069B9 |
Description
PP2B5F-box protein PP2-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR1]
Coordinates
chr2:-:606182..607919
Molecular Weight (calculated)
32016.4 Da
IEP (calculated)
8.907
GRAVY (calculated)
-0.236
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQKHGVDTR GKGAEFCGCW EILTEFINGS SASFDDLPDD CLAIISSFTS TPRDAFLAAL VSKSFGLQFN SDSVWEKFLP PPDYVSLLPK SRVFSSKKEL
101: YFALCDPFPN HNGKMSFRLD KASGKKCVML SAKKLLISRV VNPKYWKWIS IPESRFDEVP ELLNIDSFDI RGVLNTRIIS PGTHYSAYIV YTKTSHFNGF
201: QTSPIQAGVG FQRHGMSKTF IRFDSKKRQD GWMEAKIGDF YNEGGLIGFN LIEVSVVDVA RYPHMNMKSG LIIEGIEFRP KDSR
101: YFALCDPFPN HNGKMSFRLD KASGKKCVML SAKKLLISRV VNPKYWKWIS IPESRFDEVP ELLNIDSFDI RGVLNTRIIS PGTHYSAYIV YTKTSHFNGF
201: QTSPIQAGVG FQRHGMSKTF IRFDSKKRQD GWMEAKIGDF YNEGGLIGFN LIEVSVVDVA RYPHMNMKSG LIIEGIEFRP KDSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.