Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024823.1-P | Field mustard | cytosol | 64.69 | 72.38 |
| CDY03058 | Canola | cytosol | 64.38 | 72.03 |
| CDY17600 | Canola | cytosol | 64.38 | 72.03 |
| CDY70803 | Canola | cytosol | 58.44 | 70.3 |
| CDY09382 | Canola | cytosol | 58.12 | 69.92 |
| Bra026608.1-P | Field mustard | cytosol | 60.62 | 69.78 |
| AT2G02250.1 | Thale cress | cytosol | 63.75 | 65.81 |
| AT2G02360.1 | Thale cress | nucleus | 54.06 | 63.6 |
| CDY09380 | Canola | cytosol | 62.81 | 63.41 |
| Bra026606.1-P | Field mustard | plasma membrane, vacuole | 63.12 | 57.88 |
| AT2G02340.1 | Thale cress | cytosol | 49.69 | 52.13 |
| AT2G02310.1 | Thale cress | cytosol | 49.06 | 51.14 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 46.25 | 50.34 |
| AT2G02300.1 | Thale cress | cytosol | 43.44 | 48.94 |
| AT2G02320.1 | Thale cress | mitochondrion | 44.69 | 46.58 |
| CDY65052 | Canola | cytosol | 62.81 | 46.53 |
| AT2G02230.1 | Thale cress | cytosol | 46.88 | 44.64 |
| AT5G24560.1 | Thale cress | cytosol | 27.19 | 44.62 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 38.44 | 44.4 |
| PGSC0003DMT400031292 | Potato | cytosol | 40.62 | 43.77 |
| Solyc04g050990.2.1 | Tomato | cytosol | 40.0 | 43.1 |
| KRG92586 | Soybean | cytosol, plastid | 39.06 | 41.25 |
| AT1G80110.1 | Thale cress | cytosol | 33.12 | 41.25 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 39.06 | 40.85 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 36.56 | 40.77 |
| Solyc05g055870.2.1 | Tomato | cytosol | 39.06 | 40.58 |
| PGSC0003DMT400060018 | Potato | cytosol | 39.06 | 39.94 |
| KRH68844 | Soybean | cytosol | 38.12 | 38.49 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 39.69 | 36.39 |
| AT1G56250.1 | Thale cress | cytosol | 31.88 | 36.17 |
| AT1G09155.1 | Thale cress | cytosol | 32.5 | 35.99 |
| AT1G56240.1 | Thale cress | cytosol | 31.56 | 35.56 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 37.19 | 35.31 |
| AT5G52120.1 | Thale cress | cytosol | 25.62 | 28.18 |
| AT3G53000.1 | Thale cress | cytosol | 25.0 | 26.67 |
| AT3G61060.2 | Thale cress | cytosol | 24.06 | 26.46 |
| AT1G63090.1 | Thale cress | cytosol | 21.56 | 23.88 |
| AT1G12710.2 | Thale cress | cytosol | 23.12 | 22.22 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EntrezGene:814755 | EMBL:AC005312 | ProteinID:AEC05560.1 | ArrayExpress:AT2G02240 |
| EnsemblPlantsGene:AT2G02240 | RefSeq:AT2G02240 | TAIR:AT2G02240 | RefSeq:AT2G02240-TAIR-G | EnsemblPlants:AT2G02240.1 | TAIR:AT2G02240.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | InterPro:IPR001810 |
| Symbol:MEE66 | RefSeq:NP_973399.1 | PFAM:PF00646 | PFAM:PF14299 | PO:PO:0000293 | InterPro:PP2-like |
| PFscan:PS50181 | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | UniProt:Q3E6P4 | SMART:SM00256 | SUPFAM:SSF81383 |
| UniParc:UPI000034ED45 | SEG:seg | : | : | : | : |
Description
MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
Coordinates
chr2:-:592160..593724
Molecular Weight (calculated)
36719.6 Da
IEP (calculated)
7.949
GRAVY (calculated)
-0.427
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.