Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70803 | Canola | cytosol | 96.24 | 96.24 |
| Bra026608.1-P | Field mustard | cytosol | 96.62 | 92.45 |
| CDY03058 | Canola | cytosol | 79.32 | 73.78 |
| CDY17600 | Canola | cytosol | 78.57 | 73.08 |
| CDY09378 | Canola | cytosol | 69.17 | 68.15 |
| CDY09380 | Canola | cytosol | 78.2 | 65.62 |
| CDY63170 | Canola | cytosol | 59.77 | 63.86 |
| AT2G02240.1 | Thale cress | cytosol | 69.92 | 58.12 |
| CDY09379 | Canola | cytosol | 53.38 | 57.26 |
| CDY65051 | Canola | cytosol | 48.12 | 56.64 |
| CDY17599 | Canola | cytosol | 59.02 | 55.48 |
| CDY03057 | Canola | cytosol | 49.25 | 55.27 |
| CDY24793 | Canola | cytosol | 27.07 | 49.66 |
| CDY03056 | Canola | cytosol | 28.57 | 48.41 |
| CDY65052 | Canola | cytosol | 78.2 | 48.15 |
| CDY09375 | Canola | cytosol | 52.63 | 47.95 |
| CDY09376 | Canola | cytosol | 34.59 | 47.42 |
| CDY17605 | Canola | cytosol | 50.0 | 45.24 |
| CDY17601 | Canola | cytosol | 49.25 | 44.41 |
| CDY09383 | Canola | cytosol | 48.87 | 42.76 |
| CDY03062 | Canola | cytosol | 51.13 | 42.63 |
| CDY17602 | Canola | cytosol | 50.0 | 42.63 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 43.98 | 42.24 |
| CDY62670 | Canola | cytosol | 4.51 | 41.38 |
| CDY03060 | Canola | cytosol | 48.87 | 40.37 |
| CDY15823 | Canola | cytosol | 50.38 | 40.36 |
| CDY03059 | Canola | cytosol | 49.62 | 39.64 |
| CDY68805 | Canola | cytosol | 25.56 | 39.31 |
| CDX88110 | Canola | cytosol | 17.67 | 38.52 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 40.98 | 37.98 |
| CDY39994 | Canola | cytosol | 36.47 | 37.89 |
| CDX87293 | Canola | cytosol | 36.09 | 37.5 |
| Solyc04g050990.2.1 | Tomato | cytosol | 41.73 | 37.37 |
| PGSC0003DMT400031292 | Potato | cytosol | 40.98 | 36.7 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 41.73 | 36.27 |
| KRG92586 | Soybean | cytosol, plastid | 40.6 | 35.64 |
| CDY71953 | Canola | cytosol | 35.71 | 34.17 |
| CDY31110 | Canola | plastid | 34.59 | 34.07 |
| CDY72024 | Canola | plastid | 34.59 | 33.82 |
| Solyc05g055870.2.1 | Tomato | cytosol | 39.1 | 33.77 |
| CDX95006 | Canola | cytosol | 34.96 | 33.45 |
| KRH68844 | Soybean | cytosol | 39.85 | 33.44 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 42.11 | 33.23 |
| PGSC0003DMT400060018 | Potato | cytosol | 39.1 | 33.23 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 43.23 | 32.95 |
| CDY38992 | Canola | cytosol | 34.59 | 32.51 |
| CDY54100 | Canola | cytosol | 34.59 | 32.51 |
| CDY32595 | Canola | cytosol | 28.95 | 26.64 |
| CDY38901 | Canola | cytosol | 27.82 | 26.62 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.43 | 26.39 |
| CDY57080 | Canola | cytosol | 26.69 | 25.18 |
| CDX73584 | Canola | cytosol | 27.07 | 24.83 |
| CDY42484 | Canola | cytosol | 26.32 | 24.56 |
| CDX89095 | Canola | cytosol | 26.32 | 24.48 |
| CDX79690 | Canola | cytosol | 26.69 | 24.15 |
| CDX98047 | Canola | cytosol | 25.94 | 24.04 |
| CDX78140 | Canola | cytosol | 27.07 | 23.92 |
| CDX84551 | Canola | cytosol | 26.32 | 23.81 |
| CDY63226 | Canola | plastid | 25.19 | 23.1 |
| CDY45973 | Canola | cytosol | 25.19 | 23.1 |
| CDY47354 | Canola | cytosol | 24.81 | 22.76 |
| CDY49201 | Canola | cytosol | 24.44 | 22.41 |
| CDY16361 | Canola | extracellular | 15.41 | 21.35 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 23.31 | 19.2 |
Protein Annotations
| EnsemblPlants:CDY09382 | EnsemblPlantsGene:GSBRNA2T00030858001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | ProteinID:CDY09382 | ProteinID:CDY09382.1 | SMART:SM00256 |
| SUPFAM:SSF81383 | UniParc:UPI0004EE0F71 | UniProt:A0A078F8E8 | MapMan:35.1 | : | : |
Description
BnaA02g26280DBnaA02g26280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8E8]
Coordinates
chrLK031995:+:389628..391148
Molecular Weight (calculated)
29661.3 Da
IEP (calculated)
5.193
GRAVY (calculated)
-0.263
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATMGQSHG RESIISGPSP FDTLPVDCIS SIISFTSPRD ACNAASVSKT LESAAKSDSL WEKFLPLEYT SLIPQYPRVF SSKKELYFAL CDDPLLIEDG
101: KKSFRLEKAS GKRCIMISPK EVSITWGSSP EHWQWISIPE SRFEKIAELI DVCWFEIRGG MHTRYLSPGT RYSVYIVFKT KNGCPGLGDL PVDAGVGLVG
201: QESPQKLIYF VGPQARDDGW MEAELGQFYN DSCCDDISLS VGKTNTPDWK SGLIIQGFEF RPVKTR
101: KKSFRLEKAS GKRCIMISPK EVSITWGSSP EHWQWISIPE SRFEKIAELI DVCWFEIRGG MHTRYLSPGT RYSVYIVFKT KNGCPGLGDL PVDAGVGLVG
201: QESPQKLIYF VGPQARDDGW MEAELGQFYN DSCCDDISLS VGKTNTPDWK SGLIIQGFEF RPVKTR
001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
Arabidopsis Description
MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.