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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89095 Canola cytosol 97.89 97.55
AT3G61060.2 Thale cress cytosol 87.37 85.57
VIT_15s0048g01930.t01 Wine grape cytosol 64.91 64.01
HORVU2Hr1G094960.4 Barley cytosol 43.86 63.13
HORVU1Hr1G048690.1 Barley peroxisome 37.54 62.94
KRH65151 Soybean cytosol 60.35 61.21
KRH48244 Soybean cytosol 59.65 60.5
GSMUA_Achr11P... Banana cytosol 58.95 58.74
CDY57080 Canola cytosol 57.89 58.51
GSMUA_Achr5P03300_001 Banana cytosol 59.65 58.42
PGSC0003DMT400071397 Potato cytosol 58.25 57.64
GSMUA_Achr1P03900_001 Banana cytosol 58.95 57.53
Solyc01g091700.2.1 Tomato cytosol 57.54 57.14
TraesCS5D01G319500.1 Wheat cytosol 57.54 57.14
GSMUA_Achr4P27200_001 Banana cytosol 57.19 56.79
TraesCS5B01G313700.1 Wheat cytosol 57.19 56.6
HORVU5Hr1G080530.1 Barley cytosol 56.84 56.45
TraesCS5A01G312700.1 Wheat cytosol 56.84 56.45
Os09t0525300-01 Rice cytosol 55.44 56.23
Solyc10g017960.1.1 Tomato cytosol 57.54 56.16
CDX98047 Canola cytosol 56.49 56.1
CDY16361 Canola extracellular 37.54 55.73
GSMUA_Achr7P05860_001 Banana cytosol 56.49 55.52
GSMUA_Achr4P24870_001 Banana cytosol 58.95 55.45
Zm00001d029673_P001 Maize plasma membrane 57.19 55.07
PGSC0003DMT400026564 Potato cytosol 56.84 54.92
CDY45973 Canola cytosol 55.79 54.83
TraesCS2A01G400100.1 Wheat cytosol 57.19 54.7
TraesCS6A01G256100.1 Wheat cytosol 57.19 54.7
TraesCS6D01G237300.1 Wheat cytosol 57.19 54.7
TraesCS2D01G397700.1 Wheat cytosol 56.84 54.36
TraesCS6B01G269300.1 Wheat cytosol 56.84 54.36
Os03t0116700-01 Rice cytosol, extracellular 56.49 54.21
GSMUA_Achr3P12400_001 Banana cytosol 54.74 54.17
GSMUA_Achr11P... Banana cytosol 34.39 54.14
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 56.84 54.0
EER94629 Sorghum plasma membrane 56.84 53.82
CDY63226 Canola plastid 54.74 53.79
Zm00001d021224_P001 Maize cytosol 55.79 53.72
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 56.49 53.67
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 56.84 53.64
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 57.19 53.62
EER99217 Sorghum cytosol 56.14 53.51
KXG31015 Sorghum cytosol 56.49 53.49
TraesCS2B01G418200.2 Wheat cytosol 56.84 53.47
EER95641 Sorghum cytosol 55.09 53.4
CDY47354 Canola cytosol 54.04 53.1
TraesCS1A01G188700.1 Wheat plasma membrane 56.49 52.96
CDY49201 Canola cytosol 53.68 52.76
Zm00001d027361_P001 Maize cytosol 55.09 52.68
Zm00001d051447_P002 Maize cytosol 54.39 52.36
Os02t0675800-01 Rice cytosol 54.04 51.85
EES11284 Sorghum cytosol 56.84 51.76
CDX73584 Canola cytosol 52.28 51.38
CDY38901 Canola cytosol 49.47 50.72
CDY32595 Canola cytosol 50.88 50.17
TraesCS4B01G356300.1 Wheat cytosol 54.04 50.16
TraesCS4D01G350000.1 Wheat cytosol 53.33 49.51
TraesCS5A01G525700.1 Wheat cytosol 52.98 49.35
CDX79690 Canola cytosol 50.88 49.32
CDX78140 Canola cytosol 51.58 48.84
CDX84551 Canola cytosol 49.82 48.3
Zm00001d026078_P001 Maize cytosol 48.07 47.4
Os10t0522400-01 Rice cytosol 26.32 45.45
HORVU4Hr1G086110.1 Barley cytosol 23.86 44.74
Zm00001d024256_P001 Maize cytosol, mitochondrion 36.84 42.17
Zm00001d035636_P001 Maize plastid 36.49 39.85
Zm00001d021854_P001 Maize cytosol 11.58 37.5
HORVU2Hr1G049730.1 Barley cytosol 22.11 37.06
HORVU5Hr1G055050.1 Barley mitochondrion 21.75 36.47
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 28.77 34.6
CDY31110 Canola plastid 25.61 27.04
CDY17599 Canola cytosol 26.67 26.86
CDY09379 Canola cytosol 23.16 26.61
CDY72024 Canola plastid 25.26 26.47
CDY09382 Canola cytosol 24.56 26.32
CDY70803 Canola cytosol 24.56 26.32
CDY09378 Canola cytosol 24.91 26.3
CDY71953 Canola cytosol 25.61 26.26
CDX88110 Canola cytosol 11.23 26.23
CDY03058 Canola cytosol 26.32 26.22
CDY03057 Canola cytosol 21.75 26.16
CDX95006 Canola cytosol 25.26 25.9
CDY65051 Canola cytosol 20.35 25.66
CDY17600 Canola cytosol 25.61 25.52
CDY38992 Canola cytosol 24.56 24.73
CDY54100 Canola cytosol 24.21 24.38
CDY63170 Canola cytosol 21.05 24.1
CDY09376 Canola cytosol 16.14 23.71
CDY17605 Canola cytosol 24.21 23.47
CDY24793 Canola cytosol 11.93 23.45
CDX87293 Canola cytosol 21.05 23.44
CDY39994 Canola cytosol 21.05 23.44
CDY09383 Canola cytosol 24.56 23.03
CDY09380 Canola cytosol 24.56 22.08
CDY03062 Canola cytosol 24.56 21.94
CDY17601 Canola cytosol 22.46 21.69
CDY09375 Canola cytosol 21.75 21.23
CDY17602 Canola cytosol 22.81 20.83
CDY15823 Canola cytosol 24.21 20.78
CDY03056 Canola cytosol 11.23 20.38
CDY03060 Canola cytosol 22.81 20.19
CDY03059 Canola cytosol 22.11 18.92
CDY68805 Canola cytosol 11.23 18.5
CDY62670 Canola cytosol 1.75 17.24
CDY65052 Canola cytosol 24.21 15.97
CDX95004 Canola peroxisome, plasma membrane, vacuole 15.79 13.93
CDX80451 Canola cytosol, endoplasmic reticulum, plasma membrane 10.53 13.89
Protein Annotations
EnsemblPlants:CDY42484EnsemblPlantsGene:GSBRNA2T00074918001Gene3D:1.20.1280.50GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810InterPro:PP2-likePANTHER:PTHR31960PANTHER:PTHR31960:SF3
PFAM:PF00646PFAM:PF14299PFscan:PS50181ProteinID:CDY42484ProteinID:CDY42484.1SMART:SM00256
SUPFAM:SSF81383UniParc:UPI0004EAFF57UniProt:A0A078HYT2MapMan:19.2.2.8.1.4.6::
Description
BnaC04g21970DBnaC04g21970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYT2]
Coordinates
chrLK032526:+:25514..27339
Molecular Weight (calculated)
32677.2 Da
IEP (calculated)
9.233
GRAVY (calculated)
-0.394
Length
285 amino acids
Sequence
(BLAST)
001: MGANISGVTP EFDRSSEPRL SDLPENCVAL IMMELDPPEI CRLARLSRVF RRASSADFIW EPKLPPSYRA IARKVFDEIT RRKLLKKDLY AKLCRPNLFD
101: GGTKELWIDK NTGRLCVSIS SKALRITGID DRRYWSHIPT DESRFHSVAY VQQIWWFEVG GEFEIQFPSG TYSLFFRIQL GKTSKRLGRR ICNSDHIHGW
201: DIKPVRFQLA TSDNQQAVSL RYLNNNPGHW SHYHVGDFKV VNPDVSTGVK FSMTQIDCTH TKGGLCIDSV LIVPKENARK VVESE
Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)
001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
Arabidopsis Description
AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.