Factsheet for GSMUA_Achr11P17410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 1
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	70.72	44.76
GSMUA_Achr1P03900_001	Banana	cytosol	71.27	44.18
GSMUA_Achr5P03300_001	Banana	cytosol	70.72	43.99
GSMUA_Achr4P24870_001	Banana	cytosol	71.82	42.9
GSMUA_Achr4P27200_001	Banana	cytosol	66.3	41.81
Zm00001d024256_P001	Maize	cytosol, mitochondrion	54.14	39.36
Zm00001d021224_P001	Maize	cytosol	61.33	37.5
EER99217	Sorghum	cytosol	60.77	36.79
Zm00001d035636_P001	Maize	plastid	53.04	36.78
Os09t0525300-01	Rice	cytosol	56.91	36.65
TraesCS5D01G319500.1	Wheat	cytosol	56.35	35.54
HORVU5Hr1G080530.1	Barley	cytosol	56.35	35.54
VIT_15s0048g01930.t01	Wine grape	cytosol	56.35	35.29
TraesCS5A01G312700.1	Wheat	cytosol	55.8	35.19
GSMUA_Achr7P05860_001	Banana	cytosol	56.35	35.17
TraesCS5B01G313700.1	Wheat	cytosol	55.8	35.07
VIT_16s0100g00520.t01	Wine grape	cytosol	53.59	34.77
KRH48244	Soybean	cytosol	53.59	34.52
KRH65151	Soybean	cytosol	53.59	34.52
CDY42484	Canola	cytosol	54.14	34.39
GSMUA_Achr3P12400_001	Banana	cytosol	54.7	34.38
Bra014456.1-P	Field mustard	cytosol	54.14	34.27
CDX89095	Canola	cytosol	53.59	33.92
KRG91447	Soybean	cytosol, plastid	53.04	32.76
Solyc08g080360.2.1	Tomato	plastid	51.93	32.53
KRH35368	Soybean	cytosol	53.04	32.21
KRH38594	Soybean	cytosol	51.38	32.18
AT3G61060.2	Thale cress	cytosol	51.38	31.96
PGSC0003DMT400058590	Potato	plastid	50.83	31.83
VIT_02s0025g04380.t01	Wine grape	cytosol	54.14	31.72
CDY57080	Canola	cytosol	49.17	31.56
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	51.38	31.42
Solyc01g091700.2.1	Tomato	cytosol	49.72	31.36
CDX98047	Canola	cytosol	49.72	31.36
Bra019781.1-P	Field mustard	cytosol	49.72	31.36
KRH09123	Soybean	cytosol	49.72	31.14
PGSC0003DMT400010881	Potato	plastid	49.17	30.8
KRH03980	Soybean	cytosol, plastid	48.62	30.77
Solyc12g056410.1.1	Tomato	cytosol, plastid	48.62	30.45
PGSC0003DMT400071397	Potato	cytosol	48.07	30.21
CDY38901	Canola	cytosol	45.86	29.86
CDY32595	Canola	cytosol	47.51	29.76
PGSC0003DMT400026564	Potato	cytosol	48.07	29.49
Solyc10g017960.1.1	Tomato	cytosol	47.51	29.45
CDY47354	Canola	cytosol	46.96	29.31
CDY49201	Canola	cytosol	46.96	29.31
Bra027618.1-P	Field mustard	cytosol	46.96	29.31
PGSC0003DMT400037131	Potato	cytosol	47.51	29.05
Bra029137.1-P	Field mustard	cytosol	46.41	28.97
AT5G52120.1	Thale cress	cytosol	46.41	28.87
Bra027000.1-P	Field mustard	cytosol	45.86	28.62
CDY45973	Canola	cytosol	45.86	28.62
CDY63226	Canola	plastid	45.3	28.28
AT1G63090.1	Thale cress	cytosol	44.75	28.03
KRH57251	Soybean	plastid	49.72	26.39
AT1G12710.2	Thale cress	cytosol	48.07	26.13
GSMUA_Achr6P36620_001	Banana	cytosol	29.28	20.46
GSMUA_Achr1P05730_001	Banana	cytosol	29.28	19.85
GSMUA_Achr1P20450_001	Banana	plastid	28.18	19.77
GSMUA_Achr1P05750_001	Banana	cytosol	29.28	19.2
GSMUA_Achr8P03670_001	Banana	nucleus	29.83	18.88
GSMUA_Achr1P05720_001	Banana	cytosol	29.28	18.86
CDY16361	Canola	extracellular	19.34	18.23
GSMUA_Achr9P02770_001	Banana	nucleus	26.52	16.84
GSMUA_Achr5P10170_001	Banana	cytosol	11.6	13.12
Solyc03g026160.2.1	Tomato	cytosol, extracellular	7.73	9.21

Protein Annotations

EnsemblPlants:GSMUA_Achr11P17410_001	EnsemblPlants:GSMUA_Achr11T17410_001	EnsemblPlantsGene:GSMUA_Achr11G17410_001	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960
PFAM:PF00646	PFAM:PF14299	PFscan:PS50181	SUPFAM:SSF81383	UniParc:UPI000296E85A	UniProt:M0RT21
MapMan:35.1	:	:	:	:	:

Description

F-box protein PP2-A13 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17410_001]

Coordinates

chr11:-:18997701..19000528

Molecular Weight (calculated)

19927.8 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.196

Length

181 amino acids

Sequence
(BLAST)

001: MGAGASSVMG LEGEAGGQQT GLGDLPESCV AAVIVHLDPP EICRAARLSR TFRRAASADL VWETKLPSNY RRLLALASDE KNPHKKSCLE IYARLCRPNR
101: FDGGTKEFWL EKTGGGICML ISSKALLITG IDDRRYWNYI PTEESRFHTV AYLQQTWWFE VGGKLISASQ LVPTAYSSGS I

Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)

001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F

Arabidopsis Description

AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.