CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35368	Soybean	cytosol	96.59	94.97
KRH09123	Soybean	cytosol	75.43	76.47
KRH38594	Soybean	cytosol	75.09	76.12
HORVU1Hr1G048690.1	Barley	peroxisome	38.23	65.88
VIT_16s0100g00520.t01	Wine grape	cytosol	59.73	62.72
KRH65151	Soybean	cytosol	58.7	61.21
KRH48244	Soybean	cytosol	58.36	60.85
HORVU2Hr1G094960.4	Barley	cytosol	40.27	59.6
Os03t0116700-01	Rice	cytosol, extracellular	59.73	58.92
CDY38901	Canola	cytosol	54.61	57.55
KRH03980	Soybean	cytosol, plastid	55.97	57.34
Solyc03g026160.2.1	Tomato	cytosol, extracellular	29.69	57.24
CDY32595	Canola	cytosol	56.31	57.09
HORVU1Hr1G048700.4	Barley	cytosol, nucleus, plasma membrane	58.7	56.95
GSMUA_Achr11P...	Banana	cytosol	55.29	56.64
AT5G52120.1	Thale cress	cytosol	55.97	56.36
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	57.68	56.33
Bra029137.1-P	Field mustard	cytosol	55.63	56.21
Zm00001d029673_P001	Maize	plasma membrane	56.66	56.08
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	57.34	56.0
GSMUA_Achr4P27200_001	Banana	cytosol	54.61	55.75
TraesCS1A01G188700.1	Wheat	plasma membrane	57.68	55.59
EER94629	Sorghum	plasma membrane	57.0	55.48
EER95641	Sorghum	cytosol	55.63	55.44
Os09t0525300-01	Rice	cytosol	52.56	54.8
GSMUA_Achr1P03900_001	Banana	cytosol	54.61	54.79
GSMUA_Achr4P24870_001	Banana	cytosol	56.31	54.46
GSMUA_Achr5P03300_001	Banana	cytosol	53.92	54.3
GSMUA_Achr3P12400_001	Banana	cytosol	53.24	54.17
Zm00001d027361_P001	Maize	cytosol	54.95	54.03
GSMUA_Achr7P05860_001	Banana	cytosol	53.24	53.79
TraesCS2A01G400100.1	Wheat	cytosol	54.61	53.69
TraesCS5D01G319500.1	Wheat	cytosol	52.56	53.66
TraesCS5A01G312700.1	Wheat	cytosol	52.56	53.66
TraesCS2B01G418200.2	Wheat	cytosol	55.29	53.47
TraesCS6A01G256100.1	Wheat	cytosol	54.27	53.36
TraesCS6D01G237300.1	Wheat	cytosol	54.27	53.36
TraesCS2D01G397700.1	Wheat	cytosol	54.27	53.36
TraesCS5B01G313700.1	Wheat	cytosol	52.22	53.12
GSMUA_Achr11P...	Banana	cytosol	32.76	53.04
TraesCS6B01G269300.1	Wheat	cytosol	53.92	53.02
KRH32630	Soybean	cytosol, plastid	54.27	53.0
HORVU5Hr1G080530.1	Barley	cytosol	51.88	52.96
KRH67813	Soybean	cytosol	53.24	52.88
TraesCS4B01G356300.1	Wheat	cytosol	55.29	52.77
TraesCS4D01G350000.1	Wheat	cytosol	55.29	52.77
KRH20009	Soybean	cytosol, plastid	53.58	52.68
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	54.61	52.63
TraesCS5A01G525700.1	Wheat	cytosol	54.61	52.29
KXG31015	Sorghum	cytosol	53.58	52.16
Zm00001d021224_P001	Maize	cytosol	52.22	51.69
Os02t0675800-01	Rice	cytosol	52.22	51.52
EER99217	Sorghum	cytosol	51.88	50.84
Zm00001d051447_P002	Maize	cytosol	50.85	50.34
PGSC0003DMT400037131	Potato	cytosol	50.51	50.0
Os10t0522400-01	Rice	cytosol	27.99	49.7
EES11284	Sorghum	cytosol	52.22	48.88
HORVU4Hr1G086110.1	Barley	cytosol	25.26	48.68
KRH57251	Soybean	plastid	55.29	47.51
Zm00001d026078_P001	Maize	cytosol	45.39	46.02
Zm00001d021854_P001	Maize	cytosol	12.29	40.91
Zm00001d024256_P001	Maize	cytosol, mitochondrion	33.45	39.36
HORVU5Hr1G055050.1	Barley	mitochondrion	21.84	37.65
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	30.03	37.13
HORVU2Hr1G049730.1	Barley	cytosol	21.5	37.06
Zm00001d035636_P001	Maize	plastid	31.06	34.87
KRH55670	Soybean	cytosol	9.9	29.59
KRH55667	Soybean	cytosol	23.89	26.52
KRH34201	Soybean	nucleus	23.55	26.24
KRH55669	Soybean	cytosol	23.21	25.76
KRH15177	Soybean	cytosol	22.18	25.29
KRH33867	Soybean	cytosol	22.18	24.62
KRH05841	Soybean	cytosol, nucleus, peroxisome	17.75	24.3
KRG92588	Soybean	cytosol	20.48	22.56
KRH68481	Soybean	cytosol	11.95	22.15
KRG92586	Soybean	cytosol, plastid	22.87	22.11
KRH68844	Soybean	cytosol	23.89	22.08
KRG96762	Soybean	cytosol	20.82	21.25
KRH68480	Soybean	cytosol	20.82	21.25
KRH34196	Soybean	cytosol	20.48	20.13
KRG92590	Soybean	cytosol	19.11	19.79

Protein Annotations

EMBL:ACUP02012685	EnsemblPlants:KRG91447	EnsemblPlantsGene:GLYMA_20G155700	EntrezGene:100782620	Gene3D:1.20.1280.50	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like
PANTHER:PTHR31960	PANTHER:PTHR31960:SF5	PFAM:PF14299	PFscan:PS50181	ProteinID:KRG91447	ProteinID:KRG91447.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI000233DE1E	UniProt:I1NGQ3	MapMan:19.2.2.8.1.4.6	:

Description

hypothetical protein

Coordinates

chr20:-:39450560..39454083

Molecular Weight (calculated)

32909.2 Da

IEP (calculated)

8.074

GRAVY (calculated)

-0.341

Length

293 amino acids

Sequence
(BLAST)

001: MGAGVSSTNK AEKDGGGSIS SSSRDSRPGL GDFPESCISS LFMNLDPPDI CKLARVNRAF HRASSADFVW ESKLPPSYKF LANKVLGEEN IATMTKKEIY
101: AKLCLPNRFD GGTKEVWLDK CSGQVCLFMS SKSLKITGID DRRYWNYIPT EESRFQSVAY LQQMWWVEVV GELEFEFPVG SYSLVFRLQL GKASKRLGRR
201: VCNVDQVHGW DIKPVRFQLS TSDGQSSLSE CYLRGPGEWV YYNVGDFVVE KPKEPINIKF SLAQIDCTHT KGGLCVDSAI ICPTEFKERL KQS

Best Arabidopsis Sequence Match ( AT3G61060.2 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKQ ELWIDKNTGR LCLSISSKAL RITGIDDRRY WSHIPTDESR FQSAAYVQQI WWFEVGGEFE IQFPSGTYSL FFRIQLGKTS KRLGRRICNS
201: EHIHGWDIKP VRFQLATSDN QQAVSLCYLN NNPGSWSHYH VGDFKVTNPD VSTGIKFSMT QIDCTHTKGG LCIDSVLILP KECAKEVIGS Q

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.