CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20009	Soybean	cytosol, plastid	95.67	96.31
KRH67813	Soybean	cytosol	85.0	86.44
VIT_08s0007g04190.t01	Wine grape	cytosol	81.67	81.94
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	72.0	72.97
CDX79690	Canola	cytosol	71.33	72.79
AT3G53000.1	Thale cress	cytosol	72.67	72.67
CDX84551	Canola	cytosol	71.0	72.45
Bra023077.1-P	Field mustard	cytosol	70.67	72.11
CDX73584	Canola	cytosol	68.33	70.69
PGSC0003DMT400006947	Potato	cytosol	68.67	68.9
PGSC0003DMT400072413	Potato	cytosol	67.0	68.84
Bra006966.1-P	Field mustard	cytosol	69.0	68.77
CDX78140	Canola	cytosol	69.0	68.77
PGSC0003DMT400028899	Potato	cytosol	67.33	68.71
Solyc09g008820.2.1	Tomato	cytosol	68.33	68.56
Solyc10g085490.1.1	Tomato	cytosol	67.33	67.56
Solyc10g083730.1.1	Tomato	cytosol	66.67	66.89
KRH65151	Soybean	cytosol	54.0	57.65
KRH48244	Soybean	cytosol	53.0	56.58
KRH03980	Soybean	cytosol, plastid	53.0	55.59
KRG91447	Soybean	cytosol, plastid	53.0	54.27
KRH35368	Soybean	cytosol	53.0	53.36
KRH09123	Soybean	cytosol	50.67	52.6
KRH38594	Soybean	cytosol	49.67	51.56
KRH57251	Soybean	plastid	52.67	46.33
KRH15177	Soybean	cytosol	24.67	28.79
KRH55667	Soybean	cytosol	25.33	28.79
KRH55670	Soybean	cytosol	9.33	28.57
KRH55669	Soybean	cytosol	24.0	27.27
KRH34201	Soybean	nucleus	23.33	26.62
KRG92586	Soybean	cytosol, plastid	25.67	25.41
KRH33867	Soybean	cytosol	22.33	25.38
KRH68481	Soybean	cytosol	13.33	25.32
KRH05841	Soybean	cytosol, nucleus, peroxisome	17.67	24.77
KRG92588	Soybean	cytosol	21.67	24.44
KRH34196	Soybean	cytosol	23.67	23.83
KRH68844	Soybean	cytosol	23.67	22.4
KRG96762	Soybean	cytosol	21.0	21.95
KRH68480	Soybean	cytosol	21.0	21.95
KRG92590	Soybean	cytosol	19.33	20.49

Protein Annotations

EMBL:ACUP02006142	EnsemblPlants:KRH32630	EnsemblPlantsGene:GLYMA_10G064800	EntrezGene:100796143	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960
PANTHER:PTHR31960:SF7	PFAM:PF14299	PFscan:PS50181	ProteinID:KRH32630	ProteinID:KRH32630.1	SMART:SM00256
SUPFAM:SSF81383	UniParc:UPI0002963C78	UniProt:K7LHS0	MapMan:19.2.2.8.1.4.6	:	:

Description

hypothetical protein

Coordinates

chr10:-:6178462..6183190

Molecular Weight (calculated)

34026.5 Da

IEP (calculated)

7.500

GRAVY (calculated)

-0.319

Length

300 amino acids

Sequence
(BLAST)

001: MGASLSSNGS SIGPGLGDIP ESCVACVFLH LTPPEICNLA RLNRAFRGAA SSDSVWEAKL PRNYQDLLDL VPPPERHHRS LSKKDIFALL SRPLPFDHGH
101: KVGVALQEVW LDRVTGKVCM SISAKAMVIT GIDDRRYWNW IPTEESRFHT VAYLQQIWWF EVDGEVSFPF PADIYTLSFR LHLGRFSKRL GRRVCNYDHT
201: HGWDIKPVKF EFSTSDGQQA SCECCLDETE IDDTYGNHKR GYWVDYKVGE FIVSGSEPTT QVRFSMKQID CTHSKGGLCV DAVFIVPSDL RERKRRGILK

Best Arabidopsis Sequence Match ( AT3G53000.1 )
(BLAST)

001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA

Arabidopsis Description

PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.