CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32630	Soybean	cytosol, plastid	96.31	95.67
KRH67813	Soybean	cytosol	84.56	85.42
VIT_08s0007g04190.t01	Wine grape	cytosol	81.54	81.27
CDX79690	Canola	cytosol	71.81	72.79
AT3G53000.1	Thale cress	cytosol	73.15	72.67
CDX84551	Canola	cytosol	71.48	72.45
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	71.81	72.3
Bra023077.1-P	Field mustard	cytosol	71.14	72.11
CDX73584	Canola	cytosol	69.13	71.03
Bra006966.1-P	Field mustard	cytosol	69.8	69.1
CDX78140	Canola	cytosol	69.8	69.1
PGSC0003DMT400006947	Potato	cytosol	68.79	68.56
PGSC0003DMT400072413	Potato	cytosol	67.11	68.49
Solyc09g008820.2.1	Tomato	cytosol	68.46	68.23
PGSC0003DMT400028899	Potato	cytosol	66.78	67.69
Solyc10g083730.1.1	Tomato	cytosol	66.78	66.56
Solyc10g085490.1.1	Tomato	cytosol	66.78	66.56
KRH65151	Soybean	cytosol	53.36	56.58
KRH48244	Soybean	cytosol	52.35	55.52
KRH03980	Soybean	cytosol, plastid	53.02	55.24
KRG91447	Soybean	cytosol, plastid	52.68	53.58
KRH35368	Soybean	cytosol	52.68	52.68
KRH09123	Soybean	cytosol	50.34	51.9
KRH38594	Soybean	cytosol	49.33	50.87
KRH57251	Soybean	plastid	52.68	46.04
KRH15177	Soybean	cytosol	25.17	29.18
KRH55667	Soybean	cytosol	25.5	28.79
KRH55670	Soybean	cytosol	9.4	28.57
KRH55669	Soybean	cytosol	24.16	27.27
KRH34201	Soybean	nucleus	23.49	26.62
KRG92586	Soybean	cytosol, plastid	25.84	25.41
KRH33867	Soybean	cytosol	22.15	25.0
KRH05841	Soybean	cytosol, nucleus, peroxisome	17.79	24.77
KRH68481	Soybean	cytosol	13.09	24.68
KRG92588	Soybean	cytosol	21.81	24.44
KRH34196	Soybean	cytosol	23.49	23.49
KRH68844	Soybean	cytosol	23.83	22.4
KRH68480	Soybean	cytosol	21.14	21.95
KRG96762	Soybean	cytosol	21.14	21.95
KRG92590	Soybean	cytosol	19.46	20.49

Protein Annotations

EMBL:ACUP02008222	EnsemblPlants:KRH20009	EnsemblPlantsGene:GLYMA_13G149600	EntrezGene:100775493	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960
PANTHER:PTHR31960:SF7	PFAM:PF14299	PFscan:PS50181	ProteinID:KRH20009	ProteinID:KRH20009.1	SMART:SM00256
SUPFAM:SSF81383	UniParc:UPI000233B0AB	UniProt:I1LZD8	MapMan:19.2.2.8.1.4.6	:	:

Description

hypothetical protein

Coordinates

chr13:-:26314199..26318084

Molecular Weight (calculated)

33759.2 Da

IEP (calculated)

7.689

GRAVY (calculated)

-0.330

Length

298 amino acids

Sequence
(BLAST)

001: MGASLSSNGS SIGPGLGDIP ESCVACVFLH LTPPEICNLA RLNRAFRGAA SSDSVWEAKL PRNYQDLLDL VPPERHRSLS KKDIFALLSR PLPFDHGHKV
101: GAALQEVWLD RVTGKVCMSI SAKAMTINGI DDRRYWNWIP TEESRFHTVA FLQQIWWFEV DGEVTFPFPA DIYTLSFRLH LGRFSKRLGR RVCNYEHTHG
201: WDIKPVKFEF STSDGQQASC ECCLDESEIN DTYGNHKRGC WVDYKVGEFI VSGSEPTTQV RFSMKQIDCT HSKGGLCVDS VFIVPNDLRE RKRRGILK

Best Arabidopsis Sequence Match ( AT3G53000.1 )
(BLAST)

001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA

Arabidopsis Description

PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.