Factsheet for Bra023077.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84551	Canola	cytosol	98.98	98.98
VIT_08s0007g04190.t01	Wine grape	cytosol	74.83	73.58
Bra006966.1-P	Field mustard	cytosol	74.83	73.09
KRH67813	Soybean	cytosol	71.43	71.19
KRH20009	Soybean	cytosol, plastid	72.11	71.14
KRH32630	Soybean	cytosol, plastid	72.11	70.67
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	65.99	65.54
PGSC0003DMT400006947	Potato	cytosol	63.95	62.88
PGSC0003DMT400028899	Potato	cytosol	62.24	62.24
PGSC0003DMT400072413	Potato	cytosol	61.56	61.99
Solyc09g008820.2.1	Tomato	cytosol	62.93	61.87
Solyc10g083730.1.1	Tomato	cytosol	61.56	60.54
Solyc10g085490.1.1	Tomato	cytosol	61.22	60.2
Bra014456.1-P	Field mustard	cytosol	48.98	50.35
Bra019781.1-P	Field mustard	cytosol	48.64	49.83
Bra027618.1-P	Field mustard	cytosol	46.6	47.24
Bra027000.1-P	Field mustard	cytosol	45.58	46.21
Bra029137.1-P	Field mustard	cytosol	43.88	44.48
Bra018579.1-P	Field mustard	cytosol	25.17	26.62
Bra026608.1-P	Field mustard	cytosol	25.17	26.62
Bra024822.1-P	Field mustard	cytosol	19.73	26.61
Bra030758.1-P	Field mustard	cytosol	24.15	26.1
Bra035198.1-P	Field mustard	cytosol	21.77	25.0
Bra024823.1-P	Field mustard	cytosol	23.47	24.13
Bra038174.1-P	Field mustard	cytosol	22.45	23.32
Bra026604.1-P	Field mustard	cytosol	24.83	22.67
Bra024827.1-P	Field mustard	cytosol	22.45	21.02
Bra026609.1-P	Field mustard	cytosol	23.47	20.66
Bra026606.1-P	Field mustard	plasma membrane, vacuole	24.49	20.63
Bra024825.1-P	Field mustard	cytosol	20.07	20.56
Bra026603.1-P	Field mustard	cytosol	19.73	19.93
Bra026605.1-P	Field mustard	cytosol	17.01	19.16
Bra024824.1-P	Field mustard	cytosol	21.43	18.69

Protein Annotations

EnsemblPlants:Bra023077.1	EnsemblPlants:Bra023077.1-P	EnsemblPlantsGene:Bra023077	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF7
PFAM:PF14299	PFscan:PS50181	SUPFAM:SSF81383	UniParc:UPI000253FF1F	UniProt:M4E2S6	MapMan:19.2.2.8.1.4.6

Description

AT3G53000 (E=6e-135) AtPP2-A15 | AtPP2-A15 (Phloem protein 2-A15); carbohydrate binding

Coordinates

chrA03:+:8556510..8557682

Molecular Weight (calculated)

33423.0 Da

IEP (calculated)

7.690

GRAVY (calculated)

-0.292

Length

294 amino acids

Sequence
(BLAST)

001: MGLSFSNLNG EHTGSSIGPS LGDIPESCVA CVILHLTPPE ICNLARLNRA FRGAASSDSV WERKLPSNYK DLLDLLPVER YRSLSMKGVF ALLSRPIPFD
101: DGNKEVWIDR VTGRVCMAVS AKGMAITGIE DRRYWTWIDT EESRFHVVAY LQQIWWFEVD GMVRFNLPPG IYCLSFRIHL GRFSKRLGRR VCHFEHTHGW
201: EIKPVRFSLS TSDGQEASCE YYLADKEGEQ TGRESWRDYK VGEFVVGCSE ITTEVQWSMK QIDCTHSKGG ICVDSVFIIP TDVKERNKRK AGVK

Best Arabidopsis Sequence Match ( AT3G53000.1 )
(BLAST)

001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA

Arabidopsis Description

PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.