Factsheet for Bra026604.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09378	Canola	cytosol	71.12	84.81
CDY63170	Canola	cytosol	63.98	82.73
Bra024823.1-P	Field mustard	cytosol	59.94	67.48
Bra026608.1-P	Field mustard	cytosol	56.83	65.83
AT2G02250.1	Thale cress	cytosol	58.7	60.97
Bra024822.1-P	Field mustard	cytosol	39.44	58.26
Bra026605.1-P	Field mustard	cytosol	42.55	52.49
Bra026603.1-P	Field mustard	cytosol	46.27	51.2
Bra026606.1-P	Field mustard	plasma membrane, vacuole	54.66	50.43
VIT_00s0214g00130.t01	Wine grape	cytosol	40.99	47.65
Bra024827.1-P	Field mustard	cytosol	42.55	43.63
VIT_00s0214g00150.t01	Wine grape	cytosol	40.99	43.14
Bra024825.1-P	Field mustard	cytosol	38.2	42.86
Bra035198.1-P	Field mustard	cytosol	33.85	42.58
Solyc04g050990.2.1	Tomato	cytosol	39.13	42.42
KRG92586	Soybean	cytosol, plastid	39.75	42.24
PGSC0003DMT400031292	Potato	cytosol	38.2	41.41
Solyc05g055870.2.1	Tomato	cytosol	39.44	41.23
Bra026609.1-P	Field mustard	cytosol	42.24	40.72
PGSC0003DMT400060018	Potato	cytosol	39.44	40.58
Bra024824.1-P	Field mustard	cytosol	41.93	40.06
VIT_00s0214g00060.t01	Wine grape	cytosol	35.4	39.72
KRH68844	Soybean	cytosol	38.2	38.8
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	41.61	38.4
VIT_00s0214g00090.t01	Wine grape	cytosol	39.44	37.69
Bra018579.1-P	Field mustard	cytosol	31.99	37.05
Bra030758.1-P	Field mustard	cytosol	30.75	36.4
Bra038174.1-P	Field mustard	cytosol	31.37	35.69
Bra029137.1-P	Field mustard	cytosol	24.22	26.9
Bra019781.1-P	Field mustard	cytosol	23.91	26.83
Bra006966.1-P	Field mustard	cytosol	24.53	26.25
Bra027000.1-P	Field mustard	cytosol	23.6	26.21
Bra014456.1-P	Field mustard	cytosol	22.67	25.52
Bra023077.1-P	Field mustard	cytosol	22.67	24.83
Bra027618.1-P	Field mustard	cytosol	22.36	24.83

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EnsemblPlantsGene:Bra026604	EnsemblPlants:Bra026604.1	EnsemblPlants:Bra026604.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007275
GO:GO:0008150	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	InterPro:IPR001810	UniProt:M4ECU4
PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF6
SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI00025468C5	:	:	:

Description

AT2G02240 (E=1e-114) MEE66 | MEE66 (maternal effect embryo arrest 66)

Coordinates

chrA02:+:20587443..20594708

Molecular Weight (calculated)

36306.4 Da

IEP (calculated)

5.634

GRAVY (calculated)

-0.370

Length

322 amino acids

Sequence
(BLAST)

001: MKKEYKTDAS MGQTQGVDSK GKGKEGQSTA LTLKAKDKEV SGSLMGQNQS VGEIITGPSP FDDLPEDCIS NIVAFTSPRD ACVSSSVSKT FESAVRSDSV
101: WEKFLPLDYT SLAPASRAFS SKRELYFALC DHFLIDDGKK SFWLEKGSGK KCVMLAARAL WITWGSSPEY WQWISMPESR FEKVAELLSV WWFEIRGKMN
201: TRLIFLGTRY SAYIVFKTVN KCPGLADLPV EVGVGLVGQE IPKQLIYFDG YMDKDAKKER GEMRDVMKPK KREDGWMEAE LGEFFNEEGC NEIELSVIEI
301: KSPYWKCGLI IQGIEFRPTT SR

Best Arabidopsis Sequence Match ( AT2G02240.1 )
(BLAST)

001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ

Arabidopsis Description

MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.