Factsheet for Bra024823.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17600	Canola	cytosol	98.6	98.6
Bra026608.1-P	Field mustard	cytosol	76.92	79.14
AT2G02240.1	Thale cress	cytosol	72.38	64.69
Bra024822.1-P	Field mustard	cytosol	47.9	62.84
Bra026606.1-P	Field mustard	plasma membrane, vacuole	74.83	61.32
Bra026604.1-P	Field mustard	cytosol	67.48	59.94
Bra026605.1-P	Field mustard	cytosol	48.25	52.87
Bra026603.1-P	Field mustard	cytosol	51.05	50.17
Bra024827.1-P	Field mustard	cytosol	51.05	46.5
Bra024825.1-P	Field mustard	cytosol	46.5	46.34
Bra026609.1-P	Field mustard	cytosol	50.35	43.11
VIT_00s0214g00130.t01	Wine grape	cytosol	40.56	41.88
Solyc04g050990.2.1	Tomato	cytosol	42.66	41.08
Bra024824.1-P	Field mustard	cytosol	48.25	40.95
PGSC0003DMT400031292	Potato	cytosol	42.31	40.74
VIT_00s0214g00060.t01	Wine grape	cytosol	40.21	40.07
KRG92586	Soybean	cytosol, plastid	42.31	39.93
Bra035198.1-P	Field mustard	cytosol	34.27	38.28
VIT_00s0214g00150.t01	Wine grape	cytosol	40.91	38.24
KRH68844	Soybean	cytosol	41.61	37.54
Solyc05g055870.2.1	Tomato	cytosol	39.51	36.69
Bra018579.1-P	Field mustard	cytosol	35.31	36.33
PGSC0003DMT400060018	Potato	cytosol	39.51	36.1
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	43.71	35.82
Bra030758.1-P	Field mustard	cytosol	33.92	35.66
Bra038174.1-P	Field mustard	cytosol	33.92	34.28
VIT_00s0214g00090.t01	Wine grape	cytosol	39.51	33.53
Bra029137.1-P	Field mustard	cytosol	26.92	26.55
Bra014456.1-P	Field mustard	cytosol	25.87	25.87
Bra006966.1-P	Field mustard	cytosol	26.22	24.92
Bra027000.1-P	Field mustard	cytosol	24.48	24.14
Bra019781.1-P	Field mustard	cytosol	24.13	24.04
Bra023077.1-P	Field mustard	cytosol	24.13	23.47
Bra027618.1-P	Field mustard	cytosol	23.08	22.76

Protein Annotations

EnsemblPlants:Bra024823.1	EnsemblPlants:Bra024823.1-P	EnsemblPlantsGene:Bra024823	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278
PANTHER:PTHR32278:SF6	PFAM:PF00646	PFAM:PF14299	PFscan:PS50181	SEG:seg	SMART:SM00256
SUPFAM:SSF81383	UniParc:UPI000253F8D2	UniProt:M4E7R7	MapMan:35.1	:	:

Description

AT2G02240 (E=1e-118) MEE66 | MEE66 (maternal effect embryo arrest 66)

Coordinates

chrA06:+:23638973..23640131

Molecular Weight (calculated)

32549.9 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.343

Length

286 amino acids

Sequence
(BLAST)

001: MMQATMGQKQ GVESRVEDII MTGPSPFDFL PEDCISKIIS FTSPRDACVA ASVSKTFESA VKSDIVWEKF LPPEYSSLIP RSRAFSSKKE LYFALCDYPV
101: LIEEGKKSFW LEKASGKRCI MLSSKEVWIT WGSSPQYWRW VSVPESRFEK IAELLSVCWF EIRAGMHTRY LSPGTRYSVY IVFKTEDGCP GLGDIPVEAG
201: VGLVGQESSQ KLIYFVGPSG RRRDRERRDV TRPKERGDGW MEAELGELYN ESCCDDISVS VVETKSPYWK RGLIIQGFEF RPSKTQ

Best Arabidopsis Sequence Match ( AT2G02250.1 )
(BLAST)

001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI

Arabidopsis Description

PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.