Factsheet for Bra026608.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70803	Canola	cytosol	92.45	96.62
CDY09382	Canola	cytosol	92.45	96.62
Bra024823.1-P	Field mustard	cytosol	79.14	76.92
Bra026606.1-P	Field mustard	plasma membrane, vacuole	79.14	63.04
AT2G02240.1	Thale cress	cytosol	69.78	60.62
Bra024822.1-P	Field mustard	cytosol	45.68	58.26
Bra026604.1-P	Field mustard	cytosol	65.83	56.83
Bra026605.1-P	Field mustard	cytosol	47.12	50.19
Bra026603.1-P	Field mustard	cytosol	50.36	48.11
Bra024825.1-P	Field mustard	cytosol	45.68	44.25
Bra024827.1-P	Field mustard	cytosol	49.64	43.95
VIT_00s0214g00130.t01	Wine grape	cytosol	42.81	42.96
Bra026609.1-P	Field mustard	cytosol	48.2	40.12
VIT_00s0214g00060.t01	Wine grape	cytosol	40.65	39.37
Bra024824.1-P	Field mustard	cytosol	47.48	39.17
Solyc04g050990.2.1	Tomato	cytosol	41.37	38.72
PGSC0003DMT400031292	Potato	cytosol	40.65	38.05
Bra035198.1-P	Field mustard	cytosol	34.89	37.89
VIT_00s0214g00150.t01	Wine grape	cytosol	41.37	37.58
KRG92586	Soybean	cytosol, plastid	40.65	37.29
KRH68844	Soybean	cytosol	39.93	35.02
Solyc05g055870.2.1	Tomato	cytosol	38.49	34.74
Bra018579.1-P	Field mustard	cytosol	34.53	34.53
PGSC0003DMT400060018	Potato	cytosol	38.13	33.87
Bra030758.1-P	Field mustard	cytosol	32.73	33.46
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	41.37	32.95
VIT_00s0214g00090.t01	Wine grape	cytosol	39.93	32.94
Bra038174.1-P	Field mustard	cytosol	33.09	32.51
Bra029137.1-P	Field mustard	cytosol	27.34	26.21
Bra023077.1-P	Field mustard	cytosol	26.62	25.17
Bra014456.1-P	Field mustard	cytosol	25.54	24.83
Bra006966.1-P	Field mustard	cytosol	26.62	24.58
Bra019781.1-P	Field mustard	cytosol	25.18	24.39
Bra027000.1-P	Field mustard	cytosol	24.46	23.45
Bra027618.1-P	Field mustard	cytosol	23.74	22.76

Protein Annotations

EnsemblPlants:Bra026608.1	EnsemblPlants:Bra026608.1-P	EnsemblPlantsGene:Bra026608	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278
PANTHER:PTHR32278:SF6	PFAM:PF00646	PFAM:PF14299	PFscan:PS50181	SMART:SM00256	SUPFAM:SSF81383
UniParc:UPI00025468C9	UniProt:M4ECU8	MapMan:35.1	:	:	:

Description

AT2G02240 (E=9e-114) MEE66 | MEE66 (maternal effect embryo arrest 66)

Coordinates

chrA02:+:20615348..20616762

Molecular Weight (calculated)

31093.8 Da

IEP (calculated)

5.469

GRAVY (calculated)

-0.376

Length

278 amino acids

Sequence
(BLAST)

001: MEATMGQSHG RESIISGPSP FDTLPVDCIS SIISFTSPRD ACNAASVSKT LESAAKSDSL WEKFLPSEYT SLIPQYSRVF SSKKELYFAL CDEPLLIEDG
101: KKSFWLDKAS GKRCIMISPK EVSITWGSSP EHWQWISVPE SRFEKIAELV DVCWFEIRGG MHTRYLSPGT RYSVYIVFKT KNGCPGLGDL PVDAGVGLVG
201: QESPQKLIYF VGPRGRDQRR DVTRPEARDD GWMEAELGQF YNDSCCDDIS LSVGKTNTPD WKSGLIIQGF EFRPAKTR

Best Arabidopsis Sequence Match ( AT2G02240.1 )
(BLAST)

001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ

Arabidopsis Description

MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.