Factsheet for Bra014456.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89095	Canola	cytosol	99.65	99.65
AT3G61060.2	Thale cress	cytosol	86.71	85.22
HORVU1Hr1G048690.1	Barley	peroxisome	37.41	62.94
VIT_15s0048g01930.t01	Wine grape	cytosol	63.29	62.63
HORVU2Hr1G094960.4	Barley	cytosol	42.66	61.62
KRH65151	Soybean	cytosol	59.44	60.5
KRH48244	Soybean	cytosol	58.74	59.79
GSMUA_Achr11P...	Banana	cytosol	58.04	58.04
GSMUA_Achr5P03300_001	Banana	cytosol	58.74	57.73
TraesCS5D01G319500.1	Wheat	cytosol	57.34	57.14
GSMUA_Achr1P03900_001	Banana	cytosol	58.04	56.85
TraesCS5B01G313700.1	Wheat	cytosol	56.99	56.6
HORVU5Hr1G080530.1	Barley	cytosol	56.64	56.45
TraesCS5A01G312700.1	Wheat	cytosol	56.64	56.45
PGSC0003DMT400071397	Potato	cytosol	56.64	56.25
Os09t0525300-01	Rice	cytosol	55.24	56.23
Bra019781.1-P	Field mustard	cytosol	56.29	56.1
GSMUA_Achr4P27200_001	Banana	cytosol	56.29	56.1
GSMUA_Achr7P05860_001	Banana	cytosol	56.64	55.86
Solyc01g091700.2.1	Tomato	cytosol	55.94	55.75
Zm00001d029673_P001	Maize	plasma membrane	57.69	55.74
Solyc10g017960.1.1	Tomato	cytosol	56.64	55.48
GSMUA_Achr4P24870_001	Banana	cytosol	58.04	54.79
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	57.34	54.67
EER94629	Sorghum	plasma membrane	57.34	54.49
Bra027000.1-P	Field mustard	cytosol	55.24	54.48
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	56.99	54.33
PGSC0003DMT400026564	Potato	cytosol	55.94	54.24
Os03t0116700-01	Rice	cytosol, extracellular	56.29	54.21
GSMUA_Achr3P12400_001	Banana	cytosol	54.55	54.17
GSMUA_Achr11P...	Banana	cytosol	34.27	54.14
TraesCS2A01G400100.1	Wheat	cytosol	56.29	54.03
TraesCS6D01G237300.1	Wheat	cytosol	56.29	54.03
TraesCS6A01G256100.1	Wheat	cytosol	56.29	54.03
HORVU1Hr1G048700.4	Barley	cytosol, nucleus, plasma membrane	56.99	53.97
EER95641	Sorghum	cytosol	55.24	53.74
Zm00001d021224_P001	Maize	cytosol	55.59	53.72
TraesCS2D01G397700.1	Wheat	cytosol	55.94	53.69
TraesCS6B01G269300.1	Wheat	cytosol	55.94	53.69
EER99217	Sorghum	cytosol	55.94	53.51
TraesCS1A01G188700.1	Wheat	plasma membrane	56.64	53.29
Zm00001d027361_P001	Maize	cytosol	55.24	53.02
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	56.29	52.96
KXG31015	Sorghum	cytosol	55.59	52.82
TraesCS2B01G418200.2	Wheat	cytosol	55.94	52.81
Bra027618.1-P	Field mustard	cytosol	53.5	52.76
Zm00001d051447_P002	Maize	cytosol	53.5	51.69
Os02t0675800-01	Rice	cytosol	53.15	51.18
TraesCS4B01G356300.1	Wheat	cytosol	54.2	50.49
EES11284	Sorghum	cytosol	55.24	50.48
TraesCS4D01G350000.1	Wheat	cytosol	53.5	49.84
TraesCS5A01G525700.1	Wheat	cytosol	53.15	49.67
Bra006966.1-P	Field mustard	cytosol	51.75	49.17
Bra023077.1-P	Field mustard	cytosol	50.35	48.98
Bra029137.1-P	Field mustard	cytosol	49.65	48.97
Zm00001d026078_P001	Maize	cytosol	47.2	46.71
Os10t0522400-01	Rice	cytosol	26.57	46.06
HORVU4Hr1G086110.1	Barley	cytosol	24.13	45.39
Zm00001d024256_P001	Maize	cytosol, mitochondrion	36.71	42.17
Zm00001d035636_P001	Maize	plastid	36.36	39.85
Zm00001d021854_P001	Maize	cytosol	11.54	37.5
HORVU2Hr1G049730.1	Barley	cytosol	22.03	37.06
HORVU5Hr1G055050.1	Barley	mitochondrion	21.68	36.47
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	27.97	33.76
Bra024822.1-P	Field mustard	cytosol	20.98	27.52
Bra030758.1-P	Field mustard	cytosol	25.87	27.21
Bra018579.1-P	Field mustard	cytosol	25.52	26.26
Bra024823.1-P	Field mustard	cytosol	25.87	25.87
Bra026608.1-P	Field mustard	cytosol	24.83	25.54
Bra038174.1-P	Field mustard	cytosol	24.83	25.09
Bra035198.1-P	Field mustard	cytosol	21.33	23.83
Bra026605.1-P	Field mustard	cytosol	20.98	22.99
Bra026604.1-P	Field mustard	cytosol	25.52	22.67
Bra024827.1-P	Field mustard	cytosol	24.48	22.29
Bra026603.1-P	Field mustard	cytosol	21.68	21.31
Bra026609.1-P	Field mustard	cytosol	24.83	21.26
Bra026606.1-P	Field mustard	plasma membrane, vacuole	24.83	20.34
Bra024825.1-P	Field mustard	cytosol	19.58	19.51
Bra024824.1-P	Field mustard	cytosol	22.38	18.99

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	EnsemblPlantsGene:Bra014456	EnsemblPlants:Bra014456.1	EnsemblPlants:Bra014456.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0008150
GO:GO:0009611	InterPro:IPR001810	UniProt:M4DD88	PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like
PFscan:PS50181	PANTHER:PTHR31960	PANTHER:PTHR31960:SF3	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI0002543A1B

Description

AT3G61060 (E=4e-145) AtPP2-A13 | AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13); carbohydrate binding

Coordinates

chrA04:-:744683..746231

Molecular Weight (calculated)

32776.4 Da

IEP (calculated)

9.417

GRAVY (calculated)

-0.335

Length

286 amino acids

Sequence
(BLAST)

001: MGANISGVTP EFDRSSEPRL SDLPENCVAL IMMRLDPPEI CRLARLSRVF RRASSADFVW ESKLPPSYRA IARKVFDEIT LRKLLIKKDL YAKLCRPNLF
101: EGGTKELWID KNTGRLCVLV SSKALRITGI DDRRYWSHIP TDESRFHSVA YVQQIWWFEV GGEFEIQFPS GTYSLFFRIQ LGKTSKRLGR RICNSDHIHG
201: WDIKPVRFQL ATSDNQQAVS LRYLNNNPGH WSHYHVGDFK VVNPDVSTGV KFSMTQIDCT HTKGGLCIDS VLIVPKENAR KVVESE

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.