CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029673_P001	Maize	plasma membrane	94.02	95.61
HORVU1Hr1G048690.1	Barley	peroxisome	49.5	87.65
HORVU1Hr1G048700.4	Barley	cytosol, nucleus, plasma membrane	81.4	81.13
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	80.4	80.67
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	80.4	80.67
TraesCS1A01G188700.1	Wheat	plasma membrane	79.73	78.95
EER95641	Sorghum	cytosol	70.43	72.11
VIT_16s0100g00520.t01	Wine grape	cytosol	57.14	61.65
VIT_15s0048g01930.t01	Wine grape	cytosol	57.81	60.21
PGSC0003DMT400058590	Potato	plastid	57.81	60.21
Solyc08g080360.2.1	Tomato	plastid	57.48	59.86
KXG31015	Sorghum	cytosol	59.14	59.14
KRH03980	Soybean	cytosol, plastid	56.15	59.09
AT3G61060.2	Thale cress	cytosol	56.48	58.42
KRH65151	Soybean	cytosol	54.15	58.01
PGSC0003DMT400010881	Potato	plastid	55.48	57.79
KRH48244	Soybean	cytosol	53.82	57.65
CDX89095	Canola	cytosol	54.49	57.34
Bra014456.1-P	Field mustard	cytosol	54.49	57.34
VIT_02s0025g04380.t01	Wine grape	cytosol	58.8	57.28
KRG91447	Soybean	cytosol, plastid	55.48	57.0
EES11284	Sorghum	cytosol	59.14	56.87
CDY42484	Canola	cytosol	53.82	56.84
CDY16361	Canola	extracellular	36.21	56.77
Solyc12g056410.1.1	Tomato	cytosol, plastid	54.49	56.75
CDY57080	Canola	cytosol	52.82	56.38
KRH35368	Soybean	cytosol	55.48	56.04
EER99217	Sorghum	cytosol	55.48	55.85
Bra019781.1-P	Field mustard	cytosol	53.16	55.75
CDX98047	Canola	cytosol	52.82	55.4
KRH09123	Soybean	cytosol	53.16	55.36
KRH38594	Soybean	cytosol	52.16	54.33
Bra027000.1-P	Field mustard	cytosol	52.16	54.14
Solyc03g026160.2.1	Tomato	cytosol, extracellular	27.24	53.95
CDY45973	Canola	cytosol	51.83	53.79
CDY63226	Canola	plastid	51.83	53.79
CDY47354	Canola	cytosol	51.49	53.45
AT1G63090.1	Thale cress	cytosol	51.16	53.29
Bra027618.1-P	Field mustard	cytosol	51.16	53.1
CDY49201	Canola	cytosol	51.16	53.1
Solyc10g017960.1.1	Tomato	cytosol	50.17	51.71
CDY38901	Canola	cytosol	47.51	51.44
PGSC0003DMT400071397	Potato	cytosol	49.17	51.39
Solyc01g091700.2.1	Tomato	cytosol	48.84	51.22
HORVU5Hr1G055050.1	Barley	mitochondrion	28.57	50.59
HORVU2Hr1G049730.1	Barley	cytosol	28.57	50.59
CDY32595	Canola	cytosol	48.51	50.52
AT5G52120.1	Thale cress	cytosol	48.51	50.17
Bra029137.1-P	Field mustard	cytosol	47.84	49.66
KRH57251	Soybean	plastid	56.15	49.56
PGSC0003DMT400026564	Potato	cytosol	48.51	49.49
PGSC0003DMT400037131	Potato	cytosol	48.17	48.99
AT1G12710.2	Thale cress	cytosol	51.83	46.85
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	36.21	45.99
EES05998	Sorghum	cytosol	24.25	26.26
EES05996	Sorghum	cytosol	24.25	26.16
OQU85929	Sorghum	cytosol	23.26	24.56
KXG31332	Sorghum	cytosol	24.58	24.26
KXG31333	Sorghum	cytosol	24.25	24.01
KXG28410	Sorghum	cytosol	21.26	23.7
EES05994	Sorghum	cytosol	23.59	21.01
OQU85933	Sorghum	cytosol, mitochondrion	17.61	20.62
OQU92610	Sorghum	mitochondrion	20.93	16.89
OQU85932	Sorghum	mitochondrion	25.25	13.55

Protein Annotations

EnsemblPlants:EER94629	EnsemblPlantsGene:SORBI_3001G321500	EntrezGene:8063184	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF10	PFAM:PF14299	ProteinID:EER94629
ProteinID:EER94629.1	RefSeq:XP_002467631.1	SEG:seg	SUPFAM:SSF81383	unigene:Sbi.1136	UniParc:UPI0001A83113
UniProt:C5WUL8	MapMan:19.2.2.8.1.4.6	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:60904230..60907001

Molecular Weight (calculated)

33757.6 Da

IEP (calculated)

8.862

GRAVY (calculated)

-0.267

Length

301 amino acids

Sequence
(BLAST)

001: MGAWVSVLLG MDDGAAAAAA ARPAAVGLGD LPELCAAQVL LRLDPPEICS LAGLNHAFRG AAGADFVWEA KLPENYSYLM EFVGGSGDEG RRRRRRAGKK
101: EIYARLARPV PFGDGQKEFW LDKSKGMICM ALSSKALVIT GIDDRRYWQH MPTSESRFQS VAYLQQIWWF EVVGEVDFCF PVGTYSLYFR VHLGKFYKRF
201: GRRHCTSEHV HGWDKKPVRF QLSTSDGQQA LSQCYLEEPG SWVLYHAGDF VASKPDQPMK LKFSMAQIDC THTKGGLCID SVLIYPKGKG FQQERVVRSQ
301: K

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.