CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05996	Sorghum	cytosol	66.19	65.95
OQU85933	Sorghum	cytosol, mitochondrion	58.63	63.42
OQU85929	Sorghum	cytosol	64.75	63.16
TraesCS6D01G369100.1	Wheat	cytosol	66.55	62.29
TraesCS6B01G423500.1	Wheat	cytosol	66.55	62.29
TraesCS6A01G384000.2	Wheat	cytosol	66.19	61.95
TraesCS6D01G369200.1	Wheat	cytosol	65.11	61.36
TraesCS6B01G423200.1	Wheat	cytosol	66.19	60.93
Os02t0813350-01	Rice	cytosol	64.39	60.27
TraesCS6A01G384100.1	Wheat	cytosol	64.39	60.27
TraesCS4D01G262300.1	Wheat	cytosol	56.83	59.62
TraesCS7A01G063600.1	Wheat	cytosol, nucleus, peroxisome	56.12	59.54
TraesCS4B01G262300.1	Wheat	cytosol	56.12	59.09
TraesCS6D01G368900.1	Wheat	cytosol	64.75	58.63
TraesCS6A01G383900.1	Wheat	cytosol	65.11	57.46
HORVU2Hr1G104500.6	Barley	cytosol	53.96	57.25
TraesCS6D01G369000.1	Wheat	cytosol	64.39	57.19
TraesCS6B01G423400.1	Wheat	cytosol	64.39	57.01
TraesCS7D01G058100.1	Wheat	cytosol	51.44	54.58
HORVU6Hr1G090000.1	Barley	cytosol, plastid	66.19	54.44
KXG31332	Sorghum	cytosol	59.35	54.1
Os02t0813166-00	Rice	cytosol, plastid	50.36	53.44
HORVU6Hr1G090010.2	Barley	cytosol, nucleus, plastid	64.39	52.65
KXG31333	Sorghum	cytosol	57.19	52.3
KXG28410	Sorghum	cytosol	50.72	52.22
HORVU7Hr1G012610.1	Barley	cytosol	54.32	51.19
Os02t0813083-00	Rice	extracellular	20.86	50.88
TraesCS4A01G041300.1	Wheat	plastid	56.83	49.38
TraesCSU01G190600.1	Wheat	cytosol, mitochondrion	54.32	47.19
TraesCSU01G197600.1	Wheat	cytosol, mitochondrion	54.32	47.19
TraesCS4A01G320400.1	Wheat	cytosol	43.17	46.88
TraesCS5D01G035000.1	Wheat	cytosol, mitochondrion	56.47	46.73
TraesCS7A01G063200.1	Wheat	cytosol	17.27	44.44
TraesCS5B01G558600.1	Wheat	cytosol	43.53	44.16
GSMUA_Achr5P10170_001	Banana	cytosol	24.1	41.88
HORVU5Hr1G124090.2	Barley	cytosol	45.32	41.58
Bra035198.1-P	Field mustard	cytosol	37.41	40.62
CDX87293	Canola	cytosol	37.41	40.62
CDY39994	Canola	cytosol	37.41	40.62
KRH33867	Soybean	cytosol	37.41	39.39
AT1G80110.1	Thale cress	cytosol	36.33	39.3
VIT_14s0060g02020.t01	Wine grape	cytosol	40.29	39.3
VIT_14s0060g01990.t01	Wine grape	cytosol	38.49	38.63
VIT_14s0060g02000.t01	Wine grape	cytosol	39.21	37.85
EES05994	Sorghum	cytosol	45.32	37.28
PGSC0003DMT400063740	Potato	cytosol	37.77	36.59
Solyc01g099990.2.1	Tomato	cytosol	37.41	35.86
PGSC0003DMT400063744	Potato	cytosol	35.61	35.11
Solyc01g100010.2.1	Tomato	cytosol	34.53	34.53
KRG96762	Soybean	cytosol	34.89	33.8
KRH68480	Soybean	cytosol	34.89	33.8
Solyc01g100000.2.1	Tomato	cytosol	32.73	33.58
KRH68481	Soybean	cytosol	17.27	30.38
OQU92610	Sorghum	mitochondrion	33.81	25.2
EER99217	Sorghum	cytosol	26.62	24.75
EER94629	Sorghum	plasma membrane	26.26	24.25
EER95641	Sorghum	cytosol	25.18	23.81
KXG31015	Sorghum	cytosol	23.02	21.26
EES11284	Sorghum	cytosol	23.74	21.09
OQU85932	Sorghum	mitochondrion	41.73	20.68

Protein Annotations

EnsemblPlants:EES05998	EnsemblPlantsGene:SORBI_3004G340900	EntrezGene:8056428	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2	PFAM:PF14299
ProteinID:EES05998	ProteinID:EES05998.1	RefSeq:XP_002453022.1	SEG:seg	SUPFAM:SSF81383	UniParc:UPI0001A85BED
UniProt:C5XV94	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:67241345..67244565

Molecular Weight (calculated)

31094.3 Da

IEP (calculated)

6.395

GRAVY (calculated)

-0.328

Length

278 amino acids

Sequence
(BLAST)

001: MESTAPARCE IARLPEDLVS ATLARTAPRD ACRAAAVSPA FRAAADADAV WSGLLPRDLP PLADGELPAD PLPKKQLFMR LSDPGCPVLL ADRLTSMWLD
101: RATAAKCYML SARKLGIVWG DTPQYWRWIP LTLTDSRFSE CAELLAVCWL EIRGKIHCKM LSQNTTYAAY MVFKMSDRSY GLDLDYPPQR AEVSTGVTKS
201: TRRVCLQVYD SEGEDHRGPP MEHVHHAQTR TDGWMEMEMG EFNNEECEDG EVSISLTGRG GHWKRGLILH GIEIRVKK

Best Arabidopsis Sequence Match ( AT2G02230.1 )
(BLAST)

001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN

Arabidopsis Description

PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.