Factsheet for Os02t0813166-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0813083-00	Rice	extracellular	25.57	58.77
Os02t0813350-01	Rice	cytosol	61.45	54.21
Os02t0813000-00	Rice	cytosol	45.04	51.3
TraesCS4B01G262300.1	Wheat	cytosol	51.15	50.76
TraesCS4D01G262300.1	Wheat	cytosol	51.15	50.57
TraesCS6D01G369200.1	Wheat	cytosol	56.87	50.51
TraesCS6B01G423500.1	Wheat	cytosol	57.25	50.51
EES05998	Sorghum	cytosol	53.44	50.36
TraesCS6D01G369100.1	Wheat	cytosol	56.87	50.17
HORVU2Hr1G104500.6	Barley	cytosol	50.0	50.0
TraesCS6A01G384000.2	Wheat	cytosol	56.49	49.83
TraesCS7D01G058100.1	Wheat	cytosol	49.62	49.62
TraesCS6A01G384100.1	Wheat	cytosol	55.34	48.82
TraesCS7A01G063600.1	Wheat	cytosol, nucleus, peroxisome	48.47	48.47
EES05996	Sorghum	cytosol	50.76	47.67
TraesCS6A01G383900.1	Wheat	cytosol	56.87	47.3
TraesCS6B01G423200.1	Wheat	cytosol	54.2	47.02
Zm00001d018452_P001	Maize	cytosol, extracellular	53.82	46.69
TraesCS6B01G423400.1	Wheat	cytosol	55.34	46.18
TraesCS6D01G369000.1	Wheat	cytosol	54.58	45.69
TraesCS6D01G368900.1	Wheat	cytosol	53.44	45.6
OQU85929	Sorghum	cytosol	49.24	45.26
HORVU7Hr1G012610.1	Barley	cytosol	50.76	45.08
OQU85933	Sorghum	cytosol, mitochondrion	43.51	44.36
HORVU6Hr1G090000.1	Barley	cytosol, plastid	56.87	44.08
TraesCS5D01G035000.1	Wheat	cytosol, mitochondrion	54.58	42.56
TraesCS4A01G041300.1	Wheat	plastid	51.91	42.5
HORVU6Hr1G090010.2	Barley	cytosol, nucleus, plastid	53.82	41.47
TraesCS4A01G320400.1	Wheat	cytosol	40.08	41.02
TraesCS7A01G063200.1	Wheat	cytosol	16.79	40.74
TraesCSU01G190600.1	Wheat	cytosol, mitochondrion	49.24	40.31
TraesCSU01G197600.1	Wheat	cytosol, mitochondrion	49.24	40.31
TraesCS5B01G558600.1	Wheat	cytosol	40.84	39.05
VIT_14s0060g01990.t01	Wine grape	cytosol	37.4	35.38
Bra035198.1-P	Field mustard	cytosol	34.35	35.16
CDX87293	Canola	cytosol	34.35	35.16
CDY39994	Canola	cytosol	34.35	35.16
AT1G80110.1	Thale cress	cytosol	34.35	35.02
HORVU5Hr1G124090.2	Barley	cytosol	40.46	34.98
KRH33867	Soybean	cytosol	35.11	34.85
VIT_14s0060g02020.t01	Wine grape	cytosol	37.4	34.39
Os12t0131400-01	Rice	nucleus	39.31	34.11
VIT_14s0060g02000.t01	Wine grape	cytosol	36.26	32.99
PGSC0003DMT400063740	Potato	cytosol	34.73	31.71
Os02t0812500-01	Rice	cytosol	40.08	31.63
PGSC0003DMT400063744	Potato	cytosol	33.21	30.85
Solyc01g100010.2.1	Tomato	cytosol	32.44	30.58
Solyc01g099990.2.1	Tomato	cytosol	33.59	30.34
KRH68480	Soybean	cytosol	33.21	30.31
Os02t0812600-00	Rice	extracellular	52.29	30.04
KRG96762	Soybean	cytosol	32.82	29.97
KRH68481	Soybean	cytosol	17.94	29.75
GSMUA_Achr5P10170_001	Banana	cytosol	17.94	29.38
Os08t0150700-01	Rice	cytosol	33.21	29.1
Os04t0280500-00	Rice	cytosol	16.41	28.48
Solyc01g100000.2.1	Tomato	cytosol	27.48	26.57
Os12t0129700-01	Rice	cytosol	36.26	25.47
Os10t0522400-01	Rice	cytosol	12.21	19.39
Os02t0675800-01	Rice	cytosol	20.99	18.52
Os09t0525300-01	Rice	cytosol	19.47	18.15
Os03t0116700-01	Rice	cytosol, extracellular	19.85	17.51
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	19.85	17.11
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	10.69	11.81

Protein Annotations

EnsemblPlants:Os02t0813166-00	EnsemblPlantsGene:Os02g0813166	EntrezGene:9267808	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2	PFAM:PF14299
ProteinID:BAH91934.1	ProteinID:BAS81535.1	RefSeq:XP_015622625.1	SEG:seg	SUPFAM:SSF81383	UniParc:UPI0001B66D28
UniProt:C7IZ90	MapMan:35.1	:	:	:	:

Description

F-box protein 119Cyclin-like F-box domain containing protein. (Os02t0813166-00)

Coordinates

chr2:+:34824765..34825820

Molecular Weight (calculated)

29199.8 Da

IEP (calculated)

4.965

GRAVY (calculated)

-0.299

Length

262 amino acids

Sequence
(BLAST)

001: MGPSCCEIAR LPVELLSAVI SRAAPRPRDA CRASAVSPAF RAAADSDDVW SRFLPRDVPD LADGELSPPP PSNKALFLRL SGSDGNVPLL PDRLRGIWFD
101: RETGAKCYVL SARTLVIKCS ETSDYRRWIP LADSRFAEAV EFMDAPPRME IRSKIDSMVL TPNSTYAAFM VFKIADGLYE LDTSPHDATV SIGENESRRE
201: VAFTGRYPER RADGWMEVEL GEFFNEDGED GAVYMRLMSE GPNRMRGLIV LGIEIRMKRS GR

Best Arabidopsis Sequence Match ( AT2G02250.1 )
(BLAST)

001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI

Arabidopsis Description

PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.