Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G369100.1 | Wheat | cytosol | 97.98 | 97.98 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 96.63 | 96.63 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 93.94 | 82.54 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 81.48 | 80.13 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 77.78 | 73.57 |
| Os02t0813350-01 | Rice | cytosol | 70.37 | 70.37 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 67.68 | 66.56 |
| EES05998 | Sorghum | cytosol | 62.29 | 66.55 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 58.25 | 65.53 |
| EES05996 | Sorghum | cytosol | 55.56 | 59.14 |
| Os02t0813166-00 | Rice | cytosol, plastid | 50.51 | 57.25 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 48.82 | 56.42 |
| OQU85929 | Sorghum | cytosol | 53.54 | 55.79 |
| Os02t0813083-00 | Rice | extracellular | 21.21 | 55.26 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 52.53 | 52.7 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 48.15 | 52.19 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 51.18 | 51.01 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 26.94 | 50.0 |
| CDY39994 | Canola | cytosol | 38.38 | 44.53 |
| Bra035198.1-P | Field mustard | cytosol | 38.05 | 44.14 |
| CDX87293 | Canola | cytosol | 38.05 | 44.14 |
| AT1G80110.1 | Thale cress | cytosol | 37.04 | 42.8 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 39.73 | 42.6 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 40.4 | 42.11 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 44.44 | 41.77 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 38.72 | 41.52 |
| KRH33867 | Soybean | cytosol | 36.7 | 41.29 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 33.0 | 40.66 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 39.39 | 40.62 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 39.39 | 39.8 |
| PGSC0003DMT400063740 | Potato | cytosol | 38.05 | 39.37 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 39.73 | 39.33 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 39.39 | 38.74 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 38.72 | 38.72 |
| Solyc01g099990.2.1 | Tomato | cytosol | 37.71 | 38.62 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 39.73 | 38.56 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 40.07 | 38.02 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 39.06 | 36.94 |
| PGSC0003DMT400063744 | Potato | cytosol | 34.01 | 35.82 |
| Solyc01g100000.2.1 | Tomato | cytosol | 32.66 | 35.79 |
| Solyc01g100010.2.1 | Tomato | cytosol | 33.33 | 35.61 |
| KRH68480 | Soybean | cytosol | 34.01 | 35.19 |
| KRG96762 | Soybean | cytosol | 33.67 | 34.84 |
| KRH68481 | Soybean | cytosol | 18.18 | 34.18 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.3 | 29.22 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 30.3 | 28.57 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 24.92 | 25.69 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 23.57 | 23.33 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 23.23 | 22.48 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 22.56 | 22.11 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 21.21 | 21.14 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G423500.1 | EnsemblPlantsGene:TraesCS6B01G423500 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF2 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr6B:-:693322380..693324563
Molecular Weight (calculated)
32845.9 Da
IEP (calculated)
4.981
GRAVY (calculated)
-0.365
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEACEIARL PEELVSAALA RTSPRDACRA AAVSPAFRAA ADSDAVWARF LPPGGLPPLA DGELAAPAPP SSKKELFLRL SAGPALLQDR LVSVWLDRET
101: GAKCYMLSAR NLFIVWGDTP QYWTWIPLED SRFSEGAQLM HVCWFEIRGK IHSNMLSQDT TYAAYMVFKT TDNFYGLDSP VQEASISAGA TNSTRKVCLQ
201: GNDDDDGEGG VPENYQRMVP FPRLRLRRRN RRVVSHEENV ALPQQRADGW MELELGEFLN EGGDDGEVSI SLVETKGGNW KSGLIVQGIE IRRKKSG
101: GAKCYMLSAR NLFIVWGDTP QYWTWIPLED SRFSEGAQLM HVCWFEIRGK IHSNMLSQDT TYAAYMVFKT TDNFYGLDSP VQEASISAGA TNSTRKVCLQ
201: GNDDDDGEGG VPENYQRMVP FPRLRLRRRN RRVVSHEENV ALPQQRADGW MELELGEFLN EGGDDGEVSI SLVETKGGNW KSGLIVQGIE IRRKKSG
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Arabidopsis Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.