Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G566000.2 | Wheat | cytosol | 89.46 | 90.03 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 66.77 | 71.09 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 68.37 | 70.86 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 66.77 | 69.67 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 69.01 | 68.79 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 41.53 | 50.39 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 40.26 | 45.65 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 37.7 | 45.56 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 38.02 | 45.08 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 36.42 | 42.7 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 37.7 | 41.4 |
| Bra035198.1-P | Field mustard | cytosol | 33.55 | 41.02 |
| CDX87293 | Canola | cytosol | 33.55 | 41.02 |
| CDY39994 | Canola | cytosol | 33.55 | 41.02 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 37.7 | 40.97 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 38.02 | 40.2 |
| KRH33867 | Soybean | cytosol | 33.87 | 40.15 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 38.02 | 40.07 |
| PGSC0003DMT400063740 | Potato | cytosol | 36.1 | 39.37 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 34.82 | 39.35 |
| AT1G80110.1 | Thale cress | cytosol | 32.27 | 39.3 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 35.14 | 39.15 |
| Solyc01g099990.2.1 | Tomato | cytosol | 36.1 | 38.97 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 37.38 | 38.74 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 36.42 | 38.26 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 37.38 | 37.03 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 37.06 | 36.94 |
| PGSC0003DMT400063744 | Potato | cytosol | 33.23 | 36.88 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 35.14 | 35.95 |
| KRH68480 | Soybean | cytosol | 32.91 | 35.89 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 31.31 | 35.77 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 33.87 | 35.69 |
| Solyc01g100010.2.1 | Tomato | cytosol | 31.31 | 35.25 |
| KRG96762 | Soybean | cytosol | 32.27 | 35.19 |
| Solyc01g100000.2.1 | Tomato | cytosol | 28.11 | 32.47 |
| KRH68481 | Soybean | cytosol | 15.65 | 31.01 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 26.84 | 30.32 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.39 | 29.87 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 22.36 | 29.05 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 28.75 | 28.57 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 21.41 | 21.82 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 19.49 | 21.18 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 18.85 | 19.67 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 18.53 | 19.14 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 17.57 | 18.46 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G560100.1 | EnsemblPlantsGene:TraesCS5B01G560100 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SEG:seg |
| SUPFAM:SSF81383 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:706684685..706685954
Molecular Weight (calculated)
34894.0 Da
IEP (calculated)
4.715
GRAVY (calculated)
-0.385
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTMKRERK ENEEQETGGI QRIPEECLAK AVGLTSPADA CRAAAVSAAF RSAADSDAMW EQFLPPDCDA VLERAVHLVD STSKKDLFME LSDDHVLLDD
101: GKRSFGLHRS TGAKCYMMSA SELAIAWVKI DLYWRERLDP DSRFPMVAEL MSVCWFSIFG VINSRELSPS THYAAYLVFK LAHDASGLSS RSQISYVEVG
201: GQVVGSARTA SFHPCNRASC SGAAIEEASS STMNNNCVVN QPHEHKEEED EEGGIVRYPR ERVDGWLELE MGDFHTGTGH DAVVDVRMEL HEFEELQWKK
301: GLILEGIEIR PKN
101: GKRSFGLHRS TGAKCYMMSA SELAIAWVKI DLYWRERLDP DSRFPMVAEL MSVCWFSIFG VINSRELSPS THYAAYLVFK LAHDASGLSS RSQISYVEVG
201: GQVVGSARTA SFHPCNRASC SGAAIEEASS STMNNNCVVN QPHEHKEEED EEGGIVRYPR ERVDGWLELE MGDFHTGTGH DAVVDVRMEL HEFEELQWKK
301: GLILEGIEIR PKN
001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
Arabidopsis Description
PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.