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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc09g066470.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G56250.1 Solyc09g066470.2.1 AT5G44110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400063744 Potato cytosol 92.81 91.49
VIT_14s0060g02000.t01 Wine grape cytosol 57.91 55.9
Solyc01g100000.2.1 Tomato cytosol 54.32 55.72
VIT_14s0060g02020.t01 Wine grape cytosol 56.12 54.74
KRH68480 Soybean cytosol 52.16 50.52
KRG96762 Soybean cytosol 51.08 49.48
Solyc01g099990.2.1 Tomato cytosol 51.44 49.31
KRH33867 Soybean cytosol 46.4 48.86
GSMUA_Achr1P20450_001 Banana plastid 43.17 46.51
GSMUA_Achr6P36620_001 Banana cytosol 41.37 44.4
Bra038174.1-P Field mustard cytosol 44.6 43.82
CDY72024 Canola plastid 42.81 43.75
CDY31110 Canola plastid 42.45 43.7
AT1G56250.1 Thale cress cytosol 44.24 43.62
Bra018579.1-P Field mustard cytosol 43.53 43.53
CDY71953 Canola cytosol 43.53 43.53
GSMUA_Achr1P05750_001 Banana cytosol 43.17 43.48
GSMUA_Achr1P05730_001 Banana cytosol 41.73 43.45
AT1G56240.1 Thale cress cytosol 43.88 42.96
AT1G09155.1 Thale cress cytosol 44.6 42.91
CDY38992 Canola cytosol 43.53 42.76
CDY54100 Canola cytosol 43.53 42.76
Bra030758.1-P Field mustard cytosol 41.73 42.65
CDX95006 Canola cytosol 41.37 41.37
Solyc12g098190.1.1 Tomato cytosol 38.13 40.61
Solyc04g050990.2.1 Tomato cytosol 43.17 40.4
Solyc12g098200.1.1 Tomato cytosol, endoplasmic reticulum, extracellular 37.77 39.47
Solyc12g044930.1.1 Tomato cytosol 36.69 38.93
GSMUA_Achr1P05720_001 Banana cytosol 38.13 37.72
Solyc11g006740.1.1 Tomato cytosol 24.1 36.02
Solyc05g055870.2.1 Tomato cytosol 39.57 35.71
GSMUA_Achr5P10170_001 Banana cytosol 20.5 35.62
GSMUA_Achr8P03670_001 Banana nucleus 35.61 34.62
EES05998 Sorghum cytosol 34.53 34.53
TraesCS4B01G262300.1 Wheat cytosol 32.73 34.47
Solyc10g051160.1.1 Tomato cytosol 33.45 34.44
HORVU2Hr1G104500.6 Barley cytosol 32.37 34.35
Solyc04g056680.1.1 Tomato cytosol 21.94 34.27
HORVU6Hr1G089430.1 Barley cytosol, plastid 38.85 34.07
TraesCS7A01G063600.1 Wheat cytosol, nucleus, peroxisome 32.01 33.97
TraesCS4D01G262300.1 Wheat cytosol 32.37 33.96
TraesCS6D01G369200.1 Wheat cytosol 35.61 33.56
TraesCS6A01G381900.1 Wheat cytosol 38.13 33.54
Os02t0813000-00 Rice cytosol 27.7 33.48
TraesCS6B01G422300.1 Wheat cytosol 35.61 33.45
KXG28410 Sorghum cytosol 32.37 33.33
Os02t0813083-00 Rice extracellular 13.67 33.33
TraesCS6B01G423500.1 Wheat cytosol 35.61 33.33
Solyc12g096890.1.1 Tomato cytosol 19.06 33.12
TraesCS6D01G366600.1 Wheat cytosol 37.77 33.02
Os02t0813350-01 Rice cytosol 35.25 33.0
TraesCS5B01G558800.1 Wheat nucleus 34.89 32.99
TraesCS6A01G384000.2 Wheat cytosol 34.89 32.66
TraesCS6D01G369100.1 Wheat cytosol 34.89 32.66
EES05996 Sorghum cytosol 32.73 32.62
TraesCS6B01G421100.1 Wheat cytosol 37.05 32.59
TraesCS5D01G566000.2 Wheat cytosol 36.33 32.48
Os02t0813166-00 Rice cytosol, plastid 30.58 32.44
TraesCS3B01G018900.1 Wheat cytosol 34.89 32.33
TraesCS6A01G384100.1 Wheat cytosol 34.53 32.32
TraesCS7D01G351500.1 Wheat cytosol 33.45 32.29
GSMUA_Achr9P02770_001 Banana nucleus 33.09 32.28
TraesCS6B01G423200.1 Wheat cytosol 34.89 32.12
TraesCS6B01G422400.1 Wheat cytosol 34.17 31.88
TraesCS4A01G320400.1 Wheat cytosol 29.14 31.64
TraesCS6D01G368000.1 Wheat cytosol 34.89 31.6
TraesCS7A01G371000.1 Wheat cytosol 32.73 31.49
KXG31332 Sorghum cytosol 34.53 31.48
TraesCS5B01G560100.1 Wheat cytosol 35.25 31.31
TraesCS7D01G058100.1 Wheat cytosol 29.5 31.3
TraesCS6B01G423400.1 Wheat cytosol 35.25 31.21
Os04t0280500-00 Rice cytosol 16.91 31.13
TraesCS5B01G559800.1 Wheat cytosol 33.81 31.13
Zm00001d018452_P001 Maize cytosol, extracellular 33.81 31.13
Zm00001d053172_P001 Maize cytosol 33.09 31.08
CDY62670 Canola cytosol 3.24 31.03
TraesCS6D01G369000.1 Wheat cytosol 34.89 30.99
TraesCS6D01G368900.1 Wheat cytosol 34.17 30.94
Solyc05g053620.2.1 Tomato cytosol 18.35 30.91
KXG31333 Sorghum cytosol 33.45 30.59
TraesCS4A01G319200.1 Wheat cytosol 34.89 30.31
Os12t0131400-01 Rice nucleus 32.73 30.13
Os02t0812500-01 Rice cytosol 35.97 30.12
HORVU7Hr1G012610.1 Barley cytosol 31.65 29.83
HORVU6Hr1G089480.1 Barley cytosol, extracellular 18.35 29.82
OQU85929 Sorghum cytosol 30.58 29.82
Os08t0150700-01 Rice cytosol 32.01 29.77
Zm00001d051936_P001 Maize cytosol 33.45 29.71
TraesCS5B01G560000.1 Wheat cytosol 33.45 29.62
HORVU7Hr1G072570.3 Barley cytosol 31.3 29.59
TraesCS7D01G300300.1 Wheat cytosol 31.65 29.53
TraesCS6A01G383900.1 Wheat cytosol 33.45 29.52
TraesCS7A01G304800.1 Wheat cytosol 31.3 29.29
TraesCS7B01G205100.1 Wheat cytosol 31.3 29.29
HORVU6Hr1G090000.1 Barley cytosol, plastid 35.61 29.29
Zm00001d032787_P001 Maize cytosol 30.94 29.25
HORVU0Hr1G021610.3 Barley cytosol 34.17 29.23
TraesCS5B01G558600.1 Wheat cytosol 28.78 29.2
TraesCS3A01G079300.1 Wheat cytosol 32.01 29.18
HORVU6Hr1G090010.2 Barley cytosol, nucleus, plastid 35.61 29.12
EES05994 Sorghum cytosol 35.25 28.99
TraesCS7A01G063200.1 Wheat cytosol 11.15 28.7
TraesCS3D01G079700.1 Wheat cytosol 30.58 28.62
TraesCS3B01G094500.1 Wheat cytosol 31.3 28.43
HORVU3Hr1G014270.1 Barley cytosol 31.65 28.21
TraesCS4A01G041300.1 Wheat plastid 32.37 28.12
TraesCSU01G190600.1 Wheat cytosol, mitochondrion 32.37 28.12
TraesCSU01G197600.1 Wheat cytosol, mitochondrion 32.37 28.12
TraesCS6D01G043900.1 Wheat cytosol 30.22 28.0
Zm00001d024621_P001 Maize cytosol 30.58 27.69
TraesCS5D01G035000.1 Wheat cytosol, mitochondrion 33.09 27.38
TraesCS3D01G083600.1 Wheat cytosol 30.22 27.18
Zm00001d018451_P001 Maize cytosol 33.09 26.74
TraesCS6D01G367900.1 Wheat cytosol 27.7 26.74
TraesCS3A01G082500.1 Wheat plastid 20.14 26.67
TraesCS7D01G518300.2 Wheat cytosol 13.67 26.57
HORVU5Hr1G124090.2 Barley cytosol 28.42 26.07
TraesCS7A01G530500.1 Wheat extracellular 13.31 26.06
OQU85933 Sorghum cytosol, mitochondrion 23.74 25.68
TraesCS7D01G519100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 28.42 25.65
TraesCS7B01G449100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 28.06 25.32
TraesCS3B01G097600.1 Wheat cytosol 25.18 25.27
Solyc10g085490.1.1 Tomato cytosol 26.98 25.08
TraesCS7A01G531700.1 Wheat cytosol 28.06 24.76
TraesCS7D01G518400.1 Wheat cytosol 28.06 24.53
TraesCS7B01G448100.1 Wheat cytosol, extracellular 27.7 24.44
Solyc09g008820.2.1 Tomato cytosol 25.9 24.08
Solyc01g091700.2.1 Tomato cytosol 24.82 24.04
Os12t0129700-01 Rice cytosol 32.01 23.86
TraesCS6B01G422200.1 Wheat mitochondrion 20.5 23.65
Solyc08g080360.2.1 Tomato plastid 24.1 23.18
Solyc10g083730.1.1 Tomato cytosol 24.46 22.74
TraesCS7A01G530600.1 Wheat cytosol, mitochondrion 28.06 22.74
Solyc12g056410.1.1 Tomato cytosol, plastid 23.02 22.15
Solyc10g017960.1.1 Tomato cytosol 22.3 21.23
OQU92610 Sorghum mitochondrion 27.7 20.64
Os02t0812600-00 Rice extracellular 32.73 19.96
CDX95004 Canola peroxisome, plasma membrane, vacuole 21.94 18.89
Solyc03g026160.2.1 Tomato cytosol, extracellular 10.07 18.42
OQU85932 Sorghum mitochondrion 31.3 15.51
TraesCS6D01G368100.1 Wheat cytosol 29.14 14.46
Protein Annotations
EnsemblPlants:Solyc01g100010.2.1EnsemblPlantsGene:Solyc01g100010.2GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:F-box-like_dom_sf
InterPro:F-box_domInterPro:IPR001810InterPro:PP2-likePANTHER:PTHR32278PANTHER:PTHR32278:SF15PFAM:PF14299
PFscan:PS50181SUPFAM:SSF81383UniParc:UPI0002769137UniProt:K4B135MapMan:35.1:
Description
No Description!
Coordinates
chr1:-:90088144..90090143
Molecular Weight (calculated)
31440.0 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.222
Length
278 amino acids
Sequence
(BLAST)
001: MEHLYDLPED CISSIICLTS PPDALKLSQV SSIFRSVAEL DCVWDAFLPS DWQHIATKSV TPLKFSSKRH LFICLCNSIL IDDGNKSFAL DKVTGKKSYL
101: MSAKELSILY GDELTHWNWK AIPESRFAEV AELKTICRLE IEGKMKTGDL SPNTTYGAYL LMKISDRSFG LDSIPSEVSI IVGDQEPVNS SVYLRHPRSK
201: KLESLFYRNR VETLKARVNK GEEKMVGERE DGWLEIELGE FFNGGYGDEE IIMKLMEVKG CHIKGGLIIE GIQLRPKH
Best Arabidopsis Sequence Match ( AT1G09155.1 )
(BLAST)
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.