Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05994 | Sorghum | cytosol | 79.94 | 81.36 |
| Zm00001d051936_P001 | Maize | cytosol | 72.97 | 80.19 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 34.01 | 68.42 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 62.5 | 68.04 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 62.5 | 67.82 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 62.21 | 67.3 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 60.76 | 66.14 |
| Os02t0812500-01 | Rice | cytosol | 59.59 | 61.75 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 36.92 | 49.22 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 36.34 | 48.26 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 37.21 | 46.38 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 33.72 | 43.45 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 36.63 | 41.72 |
| AT1G80110.1 | Thale cress | cytosol | 29.36 | 39.3 |
| Zm00001d053172_P001 | Maize | cytosol | 33.72 | 39.19 |
| Bra035198.1-P | Field mustard | cytosol | 29.07 | 39.06 |
| CDX87293 | Canola | cytosol | 29.07 | 39.06 |
| CDY39994 | Canola | cytosol | 29.07 | 39.06 |
| KRH33867 | Soybean | cytosol | 29.65 | 38.64 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 31.1 | 38.08 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 31.4 | 37.89 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 30.23 | 37.55 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 31.1 | 37.15 |
| Zm00001d024621_P001 | Maize | cytosol | 32.27 | 36.16 |
| Zm00001d032787_P001 | Maize | cytosol | 30.81 | 36.05 |
| PGSC0003DMT400063744 | Potato | cytosol | 28.2 | 34.4 |
| KRH68480 | Soybean | cytosol | 28.2 | 33.8 |
| KRH68481 | Soybean | cytosol | 15.41 | 33.54 |
| PGSC0003DMT400063740 | Potato | cytosol | 27.91 | 33.45 |
| Solyc01g099990.2.1 | Tomato | cytosol | 27.91 | 33.1 |
| Solyc01g100010.2.1 | Tomato | cytosol | 26.74 | 33.09 |
| Solyc01g100000.2.1 | Tomato | cytosol | 25.87 | 32.84 |
| KRG96762 | Soybean | cytosol | 27.33 | 32.75 |
| Zm00001d027361_P001 | Maize | cytosol | 20.93 | 24.16 |
| Zm00001d029673_P001 | Maize | plasma membrane | 20.64 | 23.99 |
| Zm00001d021224_P001 | Maize | cytosol | 20.64 | 23.99 |
| Zm00001d051447_P002 | Maize | cytosol | 19.19 | 22.3 |
| Zm00001d026078_P001 | Maize | cytosol | 18.31 | 21.8 |
| Zm00001d021854_P001 | Maize | cytosol | 4.94 | 19.32 |
| Zm00001d024256_P001 | Maize | cytosol, mitochondrion | 13.95 | 19.28 |
| Zm00001d035636_P001 | Maize | plastid | 13.66 | 18.01 |
Protein Annotations
| EMBL:BT038324 | EnsemblPlants:Zm00001d018451_P001 | EnsemblPlants:Zm00001d018451_T001 | EnsemblPlantsGene:Zm00001d018451 | EntrezGene:100217312 | InterPro:PP2-like |
| PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | ProteinID:AQK76032.1 | SEG:seg | UniParc:UPI00017B6DC8 |
| UniProt:B4FMI6 | MapMan:35.1 | : | : | : | : |
Description
F-box protein PP2-B10
Coordinates
chr5:+:221117837..221119414
Molecular Weight (calculated)
36851.5 Da
IEP (calculated)
6.000
GRAVY (calculated)
-0.189
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MATESAAEIV CRLPEQCVAH AISLTTLGDA CHSSAVSPAP FRPAADSDAA WARFLPPDHA DDVLARADER PVAAGCCASK EDPFSRLCDC SPVLLEDGAT
101: MALVRNVAPV RSIRSGARCF VLSARALSIA WGDDPSCWTW AASPPGSRFP EVAELVDVCW LEISGKLSLS LLSPGTTYAA YLVFTMADDS YGLECHVGMP
201: PPKATVTVSS GGASGTTTTT SSGSKAVTST TTAEHAICLH HMQGEEEEAA HRRKQQYVRL RRGYGGGRKT TVLTTTREAD PDIRCPRRRG DGWAEVEMGE
301: FHVAGDEGDA AVVEVRVQEV DCRRWKRGLV VLGVEIRPKQ HTPC
101: MALVRNVAPV RSIRSGARCF VLSARALSIA WGDDPSCWTW AASPPGSRFP EVAELVDVCW LEISGKLSLS LLSPGTTYAA YLVFTMADDS YGLECHVGMP
201: PPKATVTVSS GGASGTTTTT SSGSKAVTST TTAEHAICLH HMQGEEEEAA HRRKQQYVRL RRGYGGGRKT TVLTTTREAD PDIRCPRRRG DGWAEVEMGE
301: FHVAGDEGDA AVVEVRVQEV DCRRWKRGLV VLGVEIRPKQ HTPC
001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
Arabidopsis Description
PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.