Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G366600.1 | Wheat | cytosol | 68.37 | 71.38 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 67.47 | 70.89 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 66.87 | 70.25 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 66.87 | 70.03 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 34.04 | 66.08 |
| Zm00001d051936_P001 | Maize | cytosol | 59.34 | 62.94 |
| EES05994 | Sorghum | cytosol | 62.95 | 61.83 |
| Zm00001d018451_P001 | Maize | cytosol | 61.75 | 59.59 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 39.16 | 50.39 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 39.16 | 50.19 |
| Os02t0813000-00 | Rice | cytosol | 33.13 | 47.83 |
| Os02t0813350-01 | Rice | cytosol | 42.17 | 47.14 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 38.25 | 46.01 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 35.54 | 44.19 |
| AT1G80110.1 | Thale cress | cytosol | 32.53 | 42.02 |
| Bra035198.1-P | Field mustard | cytosol | 32.23 | 41.8 |
| CDX87293 | Canola | cytosol | 32.23 | 41.8 |
| CDY39994 | Canola | cytosol | 32.23 | 41.8 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 34.64 | 40.93 |
| Os02t0813166-00 | Rice | cytosol, plastid | 31.63 | 40.08 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 33.43 | 40.07 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 34.04 | 39.65 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 34.04 | 39.24 |
| Os08t0150700-01 | Rice | cytosol | 35.24 | 39.13 |
| KRH33867 | Soybean | cytosol | 30.72 | 38.64 |
| Os12t0131400-01 | Rice | nucleus | 34.94 | 38.41 |
| PGSC0003DMT400063740 | Potato | cytosol | 32.83 | 37.98 |
| Os04t0280500-00 | Rice | cytosol | 17.17 | 37.75 |
| Os02t0813083-00 | Rice | extracellular | 12.95 | 37.72 |
| Solyc01g099990.2.1 | Tomato | cytosol | 32.53 | 37.24 |
| PGSC0003DMT400063744 | Potato | cytosol | 31.02 | 36.52 |
| KRH68480 | Soybean | cytosol | 31.33 | 36.24 |
| Solyc01g100010.2.1 | Tomato | cytosol | 30.12 | 35.97 |
| KRG96762 | Soybean | cytosol | 30.42 | 35.19 |
| Solyc01g100000.2.1 | Tomato | cytosol | 28.31 | 34.69 |
| KRH68481 | Soybean | cytosol | 16.27 | 34.18 |
| Os12t0129700-01 | Rice | cytosol | 34.04 | 30.29 |
| Os02t0812600-00 | Rice | extracellular | 40.96 | 29.82 |
| Os10t0522400-01 | Rice | cytosol | 11.75 | 23.64 |
| Os09t0525300-01 | Rice | cytosol | 19.88 | 23.49 |
| Os02t0675800-01 | Rice | cytosol | 20.48 | 22.9 |
| Os03t0116700-01 | Rice | cytosol, extracellular | 19.88 | 22.22 |
| Os04t0571300-01 | Rice | cytosol, mitochondrion, peroxisome | 19.28 | 21.05 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 9.94 | 13.92 |
Protein Annotations
| EMBL:AK106918 | EnsemblPlants:Os02t0812500-01 | EnsemblPlantsGene:Os02g0812500 | EntrezGene:4331105 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0030246 | InterPro:F-box-like_dom_sf | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 |
| PFAM:PF14299 | ProteinID:BAD22044.1 | ProteinID:BAD22384.1 | ProteinID:BAF10393.1 | ProteinID:BAS81529.1 | RefSeq:XP_015626979.1 |
| SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0000377D8B | UniProt:Q6K3F6 | MapMan:35.1 | : |
Description
F-box protein 115Cyclin-like F-box domain containing protein. (Os02t0812500-01)
Coordinates
chr2:+:34794245..34796635
Molecular Weight (calculated)
35575.4 Da
IEP (calculated)
4.894
GRAVY (calculated)
-0.108
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCEGAAAAE IYRLPEECVA YAISMTTPGD ACHSSAVSPA FRAAADSDAV WDSFLPPDHA AILARADDGI AAAGECASKK DLFARLCGRP VLLDDATMSF
101: GLDRRSGAKC VMLSARALSI AWGDDPSRWR WTPGLPGSRF PEVAELLDVC WLEITGKLQL SLLSPATTYA AYLVYSFADY TTGLECNIGM PTPMATVTVV
201: SGAGGTTSRP PAAPATTTTT EQHKICLQHM GEEETIMHRQ ELVIRLRKAF GRTVRFDPDM DIRCPRPRDG GGGGGGWREV ELGEFAVPAA GGEDGVVEVS
301: FKEETGRWKT GLIVQGIELR PKCTSKLIKL DS
101: GLDRRSGAKC VMLSARALSI AWGDDPSRWR WTPGLPGSRF PEVAELLDVC WLEITGKLQL SLLSPATTYA AYLVYSFADY TTGLECNIGM PTPMATVTVV
201: SGAGGTTSRP PAAPATTTTT EQHKICLQHM GEEETIMHRQ ELVIRLRKAF GRTVRFDPDM DIRCPRPRDG GGGGGGWREV ELGEFAVPAA GGEDGVVEVS
301: FKEETGRWKT GLIVQGIELR PKCTSKLIKL DS
001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
Arabidopsis Description
PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.