Factsheet for VIT_14s0060g01990.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063740	Potato	cytosol	64.98	62.72
Solyc01g099990.2.1	Tomato	cytosol	61.73	58.97
VIT_14s0060g02020.t01	Wine grape	cytosol	59.57	57.89
VIT_14s0060g02000.t01	Wine grape	cytosol	56.68	54.51
KRH68481	Soybean	cytosol	29.96	52.53
GSMUA_Achr1P20450_001	Banana	plastid	46.57	50.0
GSMUA_Achr1P05730_001	Banana	cytosol	46.21	47.94
GSMUA_Achr6P36620_001	Banana	cytosol	44.77	47.88
GSMUA_Achr1P05750_001	Banana	cytosol	45.85	46.01
VIT_00s0214g00130.t01	Wine grape	cytosol	42.96	42.96
GSMUA_Achr1P05720_001	Banana	cytosol	41.88	41.28
TraesCS4B01G262300.1	Wheat	cytosol	38.99	40.91
TraesCS4D01G262300.1	Wheat	cytosol	38.27	40.0
VIT_05s0051g00080.t01	Wine grape	cytosol	37.91	39.77
VIT_00s0214g00160.t01	Wine grape	cytosol	44.77	39.62
VIT_00s0214g00150.t01	Wine grape	cytosol	43.68	39.54
VIT_00s0214g00060.t01	Wine grape	cytosol	40.43	39.02
TraesCS6D01G369200.1	Wheat	cytosol	41.52	38.98
Os02t0813350-01	Rice	cytosol	41.52	38.72
TraesCS6A01G384000.2	Wheat	cytosol	41.52	38.72
TraesCS6A01G384100.1	Wheat	cytosol	41.52	38.72
TraesCS6B01G423500.1	Wheat	cytosol	41.52	38.72
GSMUA_Achr9P02770_001	Banana	nucleus	39.71	38.6
Os02t0813083-00	Rice	extracellular	15.88	38.6
HORVU2Hr1G104500.6	Barley	cytosol	36.46	38.55
EES05998	Sorghum	cytosol	38.63	38.49
TraesCS6D01G369100.1	Wheat	cytosol	41.16	38.38
TraesCS7A01G063600.1	Wheat	cytosol, nucleus, peroxisome	36.1	38.17
TraesCS5B01G558800.1	Wheat	nucleus	40.07	37.76
EES05996	Sorghum	cytosol	37.91	37.63
GSMUA_Achr5P10170_001	Banana	cytosol	21.66	37.5
GSMUA_Achr8P03670_001	Banana	nucleus	38.63	37.41
Os02t0813166-00	Rice	cytosol, plastid	35.38	37.4
TraesCS7D01G058100.1	Wheat	cytosol	35.38	37.4
TraesCS4A01G320400.1	Wheat	cytosol	34.3	37.11
TraesCS6B01G423200.1	Wheat	cytosol	40.43	37.09
TraesCS6B01G422300.1	Wheat	cytosol	39.35	36.82
OQU85929	Sorghum	cytosol	37.55	36.49
TraesCS6D01G368900.1	Wheat	cytosol	40.43	36.48
TraesCS3B01G018900.1	Wheat	cytosol	39.35	36.33
TraesCS6A01G383900.1	Wheat	cytosol	41.16	36.19
TraesCS7A01G063200.1	Wheat	cytosol	14.08	36.11
KXG28410	Sorghum	cytosol	35.02	35.93
TraesCS6B01G422400.1	Wheat	cytosol	38.63	35.91
TraesCS6D01G369000.1	Wheat	cytosol	40.43	35.78
TraesCS5D01G566000.2	Wheat	cytosol	40.07	35.69
TraesCS6B01G423400.1	Wheat	cytosol	40.43	35.67
Os02t0813000-00	Rice	cytosol	29.6	35.65
TraesCS6D01G366600.1	Wheat	cytosol	40.79	35.53
TraesCS6A01G381900.1	Wheat	cytosol	40.43	35.44
TraesCS6B01G421100.1	Wheat	cytosol	40.43	35.44
Zm00001d018452_P001	Maize	cytosol, extracellular	38.63	35.43
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	44.4	35.24
TraesCS5B01G560100.1	Wheat	cytosol	39.35	34.82
Os12t0131400-01	Rice	nucleus	37.91	34.77
HORVU6Hr1G090010.2	Barley	cytosol, nucleus, plastid	42.6	34.71
TraesCS5B01G558600.1	Wheat	cytosol	34.3	34.67
TraesCS6D01G368000.1	Wheat	cytosol	38.27	34.53
Zm00001d053172_P001	Maize	cytosol	36.82	34.46
HORVU6Hr1G089430.1	Barley	cytosol, plastid	39.35	34.38
TraesCS7A01G371000.1	Wheat	cytosol	35.74	34.26
TraesCS7D01G300300.1	Wheat	cytosol	36.82	34.23
VIT_00s0214g00090.t01	Wine grape	cytosol	41.52	34.12
KXG31332	Sorghum	cytosol	37.55	34.1
TraesCS7D01G351500.1	Wheat	cytosol	35.38	34.03
HORVU6Hr1G089480.1	Barley	cytosol, extracellular	20.94	33.92
TraesCS5B01G559800.1	Wheat	cytosol	36.82	33.77
HORVU6Hr1G090000.1	Barley	cytosol, plastid	41.16	33.73
TraesCS7B01G205100.1	Wheat	cytosol	36.1	33.67
HORVU7Hr1G012610.1	Barley	cytosol	35.74	33.56
KXG31333	Sorghum	cytosol	36.82	33.55
Zm00001d051936_P001	Maize	cytosol	37.91	33.55
TraesCS4A01G041300.1	Wheat	plastid	38.63	33.44
Os02t0812500-01	Rice	cytosol	40.07	33.43
HORVU7Hr1G072570.3	Barley	cytosol	35.38	33.33
TraesCS7A01G304800.1	Wheat	cytosol	35.74	33.33
Os04t0280500-00	Rice	cytosol	18.05	33.11
EES05994	Sorghum	cytosol	39.71	32.54
TraesCS5B01G560000.1	Wheat	cytosol	36.82	32.48
TraesCS6D01G043900.1	Wheat	cytosol	35.02	32.33
TraesCS3D01G079700.1	Wheat	cytosol	34.66	32.32
TraesCS4A01G319200.1	Wheat	cytosol	37.18	32.19
TraesCSU01G190600.1	Wheat	cytosol, mitochondrion	37.18	32.19
TraesCSU01G197600.1	Wheat	cytosol, mitochondrion	37.18	32.19
TraesCS7D01G518300.2	Wheat	cytosol	16.61	32.17
HORVU3Hr1G014270.1	Barley	cytosol	36.1	32.05
TraesCS3A01G079300.1	Wheat	cytosol	35.02	31.8
TraesCS3D01G083600.1	Wheat	cytosol	35.38	31.72
TraesCS3B01G094500.1	Wheat	cytosol	35.02	31.7
TraesCS7A01G530500.1	Wheat	extracellular	16.25	31.69
HORVU5Hr1G124090.2	Barley	cytosol	34.3	31.35
Zm00001d032787_P001	Maize	cytosol	33.21	31.29
TraesCS5D01G035000.1	Wheat	cytosol, mitochondrion	37.91	31.25
OQU85933	Sorghum	cytosol, mitochondrion	28.88	31.13
Os08t0150700-01	Rice	cytosol	33.57	31.1
HORVU0Hr1G021610.3	Barley	cytosol	36.46	31.08
TraesCS6D01G367900.1	Wheat	cytosol	32.13	30.9
Zm00001d024621_P001	Maize	cytosol	33.94	30.62
TraesCS3A01G082500.1	Wheat	plastid	23.1	30.48
Zm00001d018451_P001	Maize	cytosol	37.55	30.23
TraesCS3B01G097600.1	Wheat	cytosol	29.6	29.6
TraesCS6B01G422200.1	Wheat	mitochondrion	25.27	29.05
TraesCS7D01G519100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.41	28.25
TraesCS7B01G449100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.05	27.92
TraesCS7D01G518400.1	Wheat	cytosol	31.41	27.36
TraesCS7A01G531700.1	Wheat	cytosol	31.05	27.3
TraesCS7B01G448100.1	Wheat	cytosol, extracellular	30.32	26.67
Os12t0129700-01	Rice	cytosol	35.74	26.54
TraesCS7A01G530600.1	Wheat	cytosol, mitochondrion	30.69	24.78
Os02t0812600-00	Rice	extracellular	40.07	24.34
VIT_16s0100g00520.t01	Wine grape	cytosol	24.19	24.01
VIT_08s0007g04190.t01	Wine grape	cytosol	25.63	23.75
OQU92610	Sorghum	mitochondrion	30.32	22.52
VIT_15s0048g01930.t01	Wine grape	cytosol	23.47	22.49
VIT_02s0025g04380.t01	Wine grape	cytosol	24.91	22.33
TraesCS6D01G368100.1	Wheat	cytosol	35.38	17.5
OQU85932	Sorghum	mitochondrion	33.57	16.58

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100261367	wikigene:100261367	MapMan:35.1	EMBL:AM460399	ProteinID:CAN65690
ProteinID:CAN65690.1	ProteinID:CCB61873	ProteinID:CCB61873.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	UniProt:F6I4N6
EMBL:FN596746	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	EntrezGene:LOC100261367
wikigene:LOC100261367	PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF11
SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000198499E	ArrayExpress:VIT_14s0060g01990	EnsemblPlantsGene:VIT_14s0060g01990	EnsemblPlants:VIT_14s0060g01990.t01
RefSeq:XP_002279225	RefSeq:XP_002279225.1	:	:	:	:

Description

No Description!

Coordinates

chr14:-:1603687..1605469

Molecular Weight (calculated)

31441.7 Da

IEP (calculated)

8.044

GRAVY (calculated)

-0.338

Length

277 amino acids

Sequence
(BLAST)

001: MNFELLPQDC ISHILSCTSP RDACRSGLVS TTVRHAGDSD SVWEKFLPSD YQEILSRLVS PLVFASKKEL YSKLCRPLLI DEGRKSFSIS KTTGEKGYTL
101: SARNLSITWS SNALYWSWKP LLQSRFAETV ELRTICWLEI QGKISTCMLS PKTTYRAYLI VKFADRAYGL DALPSEVSVV VGKHQSQGIA YLRRPESNRP
201: TLERVCFLNR IEALRSKVSK GEERVPHERE DGWFEVELGE FYNDGGDEEV KMSLREVKGV HLKGGLIVEG IEIRPKD

Best Arabidopsis Sequence Match ( AT1G09155.1 )
(BLAST)

001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN

Arabidopsis Description

PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.