Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G423200.1 | Wheat | cytosol | 92.83 | 94.37 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 84.04 | 81.9 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 78.5 | 81.14 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 81.43 | 79.87 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 75.9 | 78.98 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 81.43 | 73.53 |
| Os02t0813350-01 | Rice | cytosol | 62.87 | 64.98 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 56.03 | 64.91 |
| EES05998 | Sorghum | cytosol | 58.63 | 64.75 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 60.91 | 61.92 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 51.47 | 60.31 |
| EES05996 | Sorghum | cytosol | 52.44 | 57.71 |
| OQU85929 | Sorghum | cytosol | 50.16 | 54.04 |
| Os02t0813166-00 | Rice | cytosol, plastid | 45.6 | 53.44 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 57.98 | 52.98 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 44.3 | 52.92 |
| Os02t0813083-00 | Rice | extracellular | 18.89 | 50.88 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 46.58 | 46.58 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 22.8 | 43.75 |
| AT1G80110.1 | Thale cress | cytosol | 36.48 | 43.58 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 42.35 | 43.33 |
| CDY39994 | Canola | cytosol | 35.83 | 42.97 |
| CDX87293 | Canola | cytosol | 35.83 | 42.97 |
| Bra035198.1-P | Field mustard | cytosol | 35.83 | 42.97 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 42.67 | 42.39 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 43.32 | 41.82 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 39.09 | 41.67 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 38.44 | 41.4 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 36.48 | 40.43 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 37.13 | 39.58 |
| PGSC0003DMT400063740 | Potato | cytosol | 36.81 | 39.37 |
| KRH33867 | Soybean | cytosol | 33.55 | 39.02 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 36.16 | 38.54 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 38.76 | 38.26 |
| Solyc01g099990.2.1 | Tomato | cytosol | 35.5 | 37.59 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 35.18 | 36.24 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 34.2 | 35.35 |
| KRH68480 | Soybean | cytosol | 32.57 | 34.84 |
| Solyc01g100000.2.1 | Tomato | cytosol | 30.62 | 34.69 |
| KRG96762 | Soybean | cytosol | 32.25 | 34.49 |
| Solyc01g100010.2.1 | Tomato | cytosol | 30.94 | 34.17 |
| PGSC0003DMT400063744 | Potato | cytosol | 31.27 | 34.04 |
| KRH68481 | Soybean | cytosol | 17.26 | 33.54 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 15.31 | 32.87 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.99 | 28.9 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 28.99 | 27.99 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 22.48 | 24.04 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 23.13 | 23.67 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 41.69 | 22.86 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 21.82 | 21.82 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 21.17 | 21.81 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 19.87 | 20.47 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G368900.1 | EnsemblPlantsGene:TraesCS6D01G368900 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF2 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr6D:-:455897523..455899781
Molecular Weight (calculated)
34196.5 Da
IEP (calculated)
4.080
GRAVY (calculated)
-0.551
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEACEIARL PEELLSAALA RTTPRDACRA AAVSPAFRAA ADSDDVWAGF LPPGGLPPLA DGEPPAPAPP SSKKELFLRL SAGPALLQDK LVSVWLDRET
101: GAKCYMLSAR NLFIVWGNTP EYWTWIPLED SRFSEGAELV NVCWFEIHGK IHGKMLSQGT TYAAYMVFKM DENSYGLNFP VQEASVSSGA TNLTRKVCLQ
201: ADDGDEDEYE YVEEEDEEDD EEEEDEDEDD DDEYYRALTD RRVVSHKENV TFPQKRADGW LELELGEFLN EGGDDGEVSI SLTETKSGRW KSGLIVQGIE
301: IRHKKSG
101: GAKCYMLSAR NLFIVWGNTP EYWTWIPLED SRFSEGAELV NVCWFEIHGK IHGKMLSQGT TYAAYMVFKM DENSYGLNFP VQEASVSSGA TNLTRKVCLQ
201: ADDGDEDEYE YVEEEDEEDD EEEEDEDEDD DDEYYRALTD RRVVSHKENV TFPQKRADGW LELELGEFLN EGGDDGEVSI SLTETKSGRW KSGLIVQGIE
301: IRHKKSG
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.