Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 99.33 | 99.33 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 99.0 | 97.7 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 55.33 | 97.65 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 97.67 | 97.02 |
| Zm00001d029673_P001 | Maize | plasma membrane | 79.33 | 80.41 |
| EER94629 | Sorghum | plasma membrane | 80.67 | 80.4 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 70.0 | 68.4 |
| VIT_16s0100g00520.t01 | Wine grape | cytosol | 57.0 | 61.29 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 34.33 | 60.59 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 34.33 | 60.59 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 60.0 | 60.4 |
| VIT_15s0048g01930.t01 | Wine grape | cytosol | 57.33 | 59.52 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 59.0 | 59.4 |
| AT3G61060.2 | Thale cress | cytosol | 57.0 | 58.76 |
| KRH03980 | Soybean | cytosol, plastid | 56.0 | 58.74 |
| KRH65151 | Soybean | cytosol | 55.0 | 58.72 |
| KRH48244 | Soybean | cytosol | 55.0 | 58.72 |
| Solyc08g080360.2.1 | Tomato | plastid | 56.0 | 58.13 |
| PGSC0003DMT400058590 | Potato | plastid | 56.0 | 58.13 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 55.33 | 57.84 |
| KRG91447 | Soybean | cytosol, plastid | 56.33 | 57.68 |
| CDY57080 | Canola | cytosol | 54.0 | 57.45 |
| Bra014456.1-P | Field mustard | cytosol | 54.33 | 56.99 |
| CDX89095 | Canola | cytosol | 54.33 | 56.99 |
| CDY42484 | Canola | cytosol | 54.0 | 56.84 |
| Bra019781.1-P | Field mustard | cytosol | 54.33 | 56.79 |
| KRH35368 | Soybean | cytosol | 56.33 | 56.71 |
| VIT_02s0025g04380.t01 | Wine grape | cytosol | 58.33 | 56.63 |
| CDX98047 | Canola | cytosol | 54.0 | 56.45 |
| PGSC0003DMT400010881 | Potato | plastid | 54.33 | 56.4 |
| CDY16361 | Canola | extracellular | 36.0 | 56.25 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 53.67 | 55.71 |
| CDY47354 | Canola | cytosol | 53.67 | 55.52 |
| Bra027000.1-P | Field mustard | cytosol | 53.67 | 55.52 |
| Bra027618.1-P | Field mustard | cytosol | 53.33 | 55.17 |
| CDY63226 | Canola | plastid | 53.33 | 55.17 |
| CDY49201 | Canola | cytosol | 53.33 | 55.17 |
| CDY45973 | Canola | cytosol | 53.33 | 55.17 |
| AT1G63090.1 | Thale cress | cytosol | 52.67 | 54.67 |
| KRH09123 | Soybean | cytosol | 52.67 | 54.67 |
| KRH38594 | Soybean | cytosol | 52.0 | 53.98 |
| Solyc03g026160.2.1 | Tomato | cytosol, extracellular | 27.0 | 53.29 |
| Solyc10g017960.1.1 | Tomato | cytosol | 51.33 | 52.74 |
| PGSC0003DMT400071397 | Potato | cytosol | 50.0 | 52.08 |
| Solyc01g091700.2.1 | Tomato | cytosol | 49.67 | 51.92 |
| CDY38901 | Canola | cytosol | 48.0 | 51.8 |
| CDY32595 | Canola | cytosol | 49.33 | 51.21 |
| AT5G52120.1 | Thale cress | cytosol | 49.0 | 50.52 |
| PGSC0003DMT400026564 | Potato | cytosol | 49.67 | 50.51 |
| Bra029137.1-P | Field mustard | cytosol | 48.67 | 50.34 |
| KRH57251 | Soybean | plastid | 56.67 | 49.85 |
| AT1G12710.2 | Thale cress | cytosol | 53.67 | 48.35 |
| PGSC0003DMT400037131 | Potato | cytosol | 47.33 | 47.97 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 37.0 | 46.84 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 12.67 | 26.57 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 22.33 | 25.28 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 23.67 | 24.65 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 23.67 | 24.07 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 23.33 | 23.57 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 23.0 | 23.15 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 23.67 | 23.13 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 19.67 | 22.52 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 22.0 | 22.22 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 23.0 | 22.04 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 22.67 | 21.38 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 21.67 | 21.1 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 21.0 | 20.26 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 20.67 | 19.5 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 21.33 | 19.05 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 19.33 | 18.89 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 18.33 | 18.33 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 18.33 | 17.8 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 16.33 | 17.01 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 18.33 | 9.82 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G187700.1 | EnsemblPlantsGene:TraesCS1D01G187700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF10 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 |
| MapMan:19.2.2.8.1.4.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:259777644..259779605
Molecular Weight (calculated)
33611.2 Da
IEP (calculated)
9.204
GRAVY (calculated)
-0.273
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAGVSSFFF GAAAEAAPGA AGLGDLPELC AAQVLLRLDA PEICRLARLN HAFRGAAGAD FVWEAKLPEN YRHLIGYVEG GGEEGRRRRR RAGTKEIYAR
101: LSRPVSFDDG TKEFWLEKSK GRVCMALSSK ALVITGIDDR RYWTHMPTTE SRFQSVAYLQ QIWWFEVVGE LDFCFPVGTY SLYFRVHLGK FSKRFGRRVC
201: STEHVHGWNK KPVRFQLSTS DGQNALSQCY LDEPGSWVLY HAGDFVSTNP RQALKLKFSM AQIDCTHTKG GLCVDSVLVY PKGFQQEKVV TGKISEMRSS
101: LSRPVSFDDG TKEFWLEKSK GRVCMALSSK ALVITGIDDR RYWTHMPTTE SRFQSVAYLQ QIWWFEVVGE LDFCFPVGTY SLYFRVHLGK FSKRFGRRVC
201: STEHVHGWNK KPVRFQLSTS DGQNALSQCY LDEPGSWVLY HAGDFVSTNP RQALKLKFSM AQIDCTHTKG GLCVDSVLVY PKGFQQEKVV TGKISEMRSS
001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
Arabidopsis Description
AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.