Factsheet for TraesCS6D01G237300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G256100.1	Wheat	cytosol	100.0	100.0
TraesCS6B01G269300.1	Wheat	cytosol	99.33	99.33
Os02t0675800-01	Rice	cytosol	81.54	81.82
Zm00001d051447_P002	Maize	cytosol	79.53	80.07
KXG31015	Sorghum	cytosol	80.54	79.73
TraesCS2D01G397700.1	Wheat	cytosol	78.19	78.19
GSMUA_Achr1P03900_001	Banana	cytosol	63.09	64.38
GSMUA_Achr11P...	Banana	cytosol	61.41	63.99
GSMUA_Achr4P27200_001	Banana	cytosol	60.74	63.07
GSMUA_Achr5P03300_001	Banana	cytosol	61.41	62.89
VIT_15s0048g01930.t01	Wine grape	cytosol	57.38	59.17
GSMUA_Achr4P24870_001	Banana	cytosol	60.07	59.08
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	59.4	59.0
PGSC0003DMT400058590	Potato	plastid	56.38	58.13
Solyc08g080360.2.1	Tomato	plastid	56.04	57.79
KRH48244	Soybean	cytosol	54.03	57.3
CDY42484	Canola	cytosol	54.7	57.19
TraesCS5D01G319500.1	Wheat	cytosol	55.03	57.14
KRH65151	Soybean	cytosol	53.69	56.94
CDX89095	Canola	cytosol	54.36	56.64
VIT_16s0100g00520.t01	Wine grape	cytosol	53.02	56.63
Bra014456.1-P	Field mustard	cytosol	54.03	56.29
VIT_02s0025g04380.t01	Wine grape	cytosol	58.05	55.99
AT3G61060.2	Thale cress	cytosol	54.36	55.67
KRH03980	Soybean	cytosol, plastid	53.36	55.59
PGSC0003DMT400010881	Potato	plastid	53.36	55.02
TraesCS4D01G350000.1	Wheat	cytosol	56.38	54.72
Solyc12g056410.1.1	Tomato	cytosol, plastid	52.68	54.33
KRG91447	Soybean	cytosol, plastid	53.36	54.27
KRH35368	Soybean	cytosol	53.69	53.69
CDY57080	Canola	cytosol	50.67	53.55
Bra019781.1-P	Field mustard	cytosol	50.67	52.61
Solyc01g091700.2.1	Tomato	cytosol	50.67	52.61
CDX98047	Canola	cytosol	50.34	52.26
PGSC0003DMT400071397	Potato	cytosol	50.34	52.08
Solyc03g026160.2.1	Tomato	cytosol, extracellular	26.51	51.97
KRH38594	Soybean	cytosol	50.34	51.9
CDY16361	Canola	extracellular	33.22	51.56
KRH09123	Soybean	cytosol	50.0	51.56
Bra027618.1-P	Field mustard	cytosol	50.0	51.38
CDY49201	Canola	cytosol	50.0	51.38
CDY47354	Canola	cytosol	50.0	51.38
Solyc10g017960.1.1	Tomato	cytosol	50.0	51.03
PGSC0003DMT400026564	Potato	cytosol	49.66	50.17
AT1G63090.1	Thale cress	cytosol	48.32	49.83
Bra027000.1-P	Field mustard	cytosol	47.99	49.31
CDY63226	Canola	plastid	47.99	49.31
CDY45973	Canola	cytosol	47.99	49.31
PGSC0003DMT400037131	Potato	cytosol	48.66	48.99
CDY38901	Canola	cytosol	45.64	48.92
AT5G52120.1	Thale cress	cytosol	46.98	48.11
CDY32595	Canola	cytosol	45.97	47.4
Bra029137.1-P	Field mustard	cytosol	45.97	47.24
KRH57251	Soybean	plastid	53.02	46.33
AT1G12710.2	Thale cress	cytosol	51.01	45.65
TraesCS7D01G518300.2	Wheat	cytosol	12.75	26.57
TraesCS4D01G262300.1	Wheat	cytosol	21.48	24.15
TraesCS7D01G351500.1	Wheat	cytosol	21.48	22.22
TraesCS7D01G300300.1	Wheat	cytosol	21.48	21.48
TraesCS6D01G369100.1	Wheat	cytosol	21.14	21.21
TraesCS6D01G369200.1	Wheat	cytosol	20.47	20.68
TraesCS7D01G058100.1	Wheat	cytosol	18.12	20.61
TraesCS3D01G079700.1	Wheat	cytosol	20.13	20.2
TraesCS7D01G519100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.81	20.13
TraesCS6D01G366600.1	Wheat	cytosol	21.48	20.13
TraesCS6D01G368900.1	Wheat	cytosol	20.47	19.87
TraesCS5D01G566000.2	Wheat	cytosol	19.8	18.97
TraesCS6D01G368000.1	Wheat	cytosol	19.46	18.89
TraesCS7D01G518400.1	Wheat	cytosol	20.13	18.87
TraesCS6D01G369000.1	Wheat	cytosol	19.8	18.85
TraesCS5D01G035000.1	Wheat	cytosol, mitochondrion	20.47	18.15
TraesCS3D01G083600.1	Wheat	cytosol	17.79	17.15
TraesCS6D01G043900.1	Wheat	cytosol	16.78	16.67
TraesCS6D01G367900.1	Wheat	cytosol	14.77	15.28
TraesCS6D01G368100.1	Wheat	cytosol	18.12	9.64

Protein Annotations

EnsemblPlants:TraesCS6D01G237300.1	EnsemblPlantsGene:TraesCS6D01G237300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF8	PFAM:PF14299	SEG:seg	SUPFAM:SSF81383
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:335980309..335984926

Molecular Weight (calculated)

32925.0 Da

IEP (calculated)

5.623

GRAVY (calculated)

-0.238

Length

298 amino acids

Sequence
(BLAST)

001: MGTGSSILGA DADWGETSLG DMPESCVAAV LLNLDPPEIC QVACLNRAFR GAASADCVWA GKLPANYRYL AALAAAADDE GDGDGDGNVK PCSPISTKKG
101: IYARLCRPTP FDGGTKEFWI EKNKGGLCMS ISSKAMAITG IDDRRYWSHL VTEESRFHSV AYLQQIWWLE VGGELDFCFP AGSYSLFFRL HLGRAHRRMG
201: RRVCGTELIH GWDARPTRFQ LSTSDEQQAT SEYYLDGPGS WILYHVGDFV ISNSDELTSL KYSMMQIDCT HTKGGLCVDS VAIYPKGYRR ENMNMVYM

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.