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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 6
  • cytosol 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g056410.1.1 Tomato cytosol, plastid 96.89 96.89
PGSC0003DMT400058590 Potato plastid 77.16 77.16
KRH03980 Soybean cytosol, plastid 62.63 63.29
CDY57080 Canola cytosol 60.55 62.06
VIT_02s0025g04380.t01 Wine grape cytosol 65.74 61.49
Bra019781.1-P Field mustard cytosol 60.9 61.32
CDX98047 Canola cytosol 60.55 60.98
HORVU1Hr1G048690.1 Barley peroxisome 35.64 60.59
HORVU2Hr1G094960.4 Barley cytosol 40.83 59.6
GSMUA_Achr4P27200_001 Banana cytosol 58.82 59.23
GSMUA_Achr5P03300_001 Banana cytosol 57.79 57.39
CDY63226 Canola plastid 56.75 56.55
CDY47354 Canola cytosol 56.75 56.55
CDY16361 Canola extracellular 37.37 56.25
Os02t0675800-01 Rice cytosol 57.79 56.23
CDY49201 Canola cytosol 56.4 56.21
CDY45973 Canola cytosol 56.4 56.21
Bra027618.1-P Field mustard cytosol 56.4 56.21
GSMUA_Achr1P03900_001 Banana cytosol 56.75 56.16
Zm00001d029673_P001 Maize plasma membrane 57.44 56.08
AT1G63090.1 Thale cress cytosol 56.06 56.06
Bra027000.1-P Field mustard cytosol 56.06 55.86
EER94629 Sorghum plasma membrane 57.79 55.48
EER95641 Sorghum cytosol 56.4 55.44
GSMUA_Achr11P... Banana cytosol 54.67 55.24
GSMUA_Achr4P24870_001 Banana cytosol 57.09 54.46
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 56.4 54.33
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 56.06 54.0
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 56.4 53.97
Os03t0116700-01 Rice cytosol, extracellular 55.36 53.87
PGSC0003DMT400071397 Potato cytosol 53.63 53.82
Os09t0525300-01 Rice cytosol 52.25 53.74
TraesCS5A01G312700.1 Wheat cytosol 53.29 53.66
GSMUA_Achr3P12400_001 Banana cytosol 53.29 53.47
TraesCS6D01G237300.1 Wheat cytosol 55.02 53.36
TraesCS6A01G256100.1 Wheat cytosol 55.02 53.36
Zm00001d027361_P001 Maize cytosol 55.02 53.36
HORVU5Hr1G080530.1 Barley cytosol 52.94 53.31
TraesCS5D01G319500.1 Wheat cytosol 52.94 53.31
TraesCS1A01G188700.1 Wheat plasma membrane 56.06 53.29
TraesCS5B01G313700.1 Wheat cytosol 52.94 53.12
TraesCS6B01G269300.1 Wheat cytosol 54.67 53.02
KRH57251 Soybean plastid 62.28 52.79
GSMUA_Achr7P05860_001 Banana cytosol 52.94 52.76
TraesCS2A01G400100.1 Wheat cytosol 54.33 52.68
Zm00001d021224_P001 Maize cytosol 53.63 52.36
TraesCS2D01G397700.1 Wheat cytosol 53.98 52.35
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 55.02 52.3
EER99217 Sorghum cytosol 53.98 52.17
KXG31015 Sorghum cytosol 54.33 52.16
TraesCS2B01G418200.2 Wheat cytosol 54.33 51.82
AT1G12710.2 Thale cress cytosol 59.17 51.35
Zm00001d051447_P002 Maize cytosol 52.6 51.35
PGSC0003DMT400026564 Potato cytosol 52.25 51.19
TraesCS4B01G356300.1 Wheat cytosol 53.63 50.49
TraesCS4D01G350000.1 Wheat cytosol 52.94 49.84
TraesCS5A01G525700.1 Wheat cytosol 52.6 49.67
PGSC0003DMT400037131 Potato cytosol 50.52 49.32
PGSC0003DMT400028899 Potato cytosol 50.17 49.32
GSMUA_Achr11P... Banana cytosol 30.8 49.17
EES11284 Sorghum cytosol 52.94 48.88
PGSC0003DMT400072413 Potato cytosol 48.44 47.95
Os10t0522400-01 Rice cytosol 27.34 47.88
PGSC0003DMT400006947 Potato cytosol 49.13 47.49
Zm00001d026078_P001 Maize cytosol 46.37 46.37
HORVU4Hr1G086110.1 Barley cytosol 23.53 44.74
Zm00001d024256_P001 Maize cytosol, mitochondrion 35.64 41.37
Zm00001d021854_P001 Maize cytosol 11.76 38.64
Zm00001d035636_P001 Maize plastid 33.22 36.78
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 28.37 34.6
HORVU2Hr1G049730.1 Barley cytosol 18.69 31.76
HORVU5Hr1G055050.1 Barley mitochondrion 18.34 31.18
PGSC0003DMT400083888 Potato cytosol 23.53 25.76
PGSC0003DMT400043434 Potato cytosol 23.53 25.56
PGSC0003DMT400096249 Potato cytosol 20.76 23.44
PGSC0003DMT400076213 Potato cytosol 18.69 23.18
PGSC0003DMT400027718 Potato cytosol 23.88 23.0
PGSC0003DMT400063744 Potato cytosol 22.15 22.7
PGSC0003DMT400060018 Potato cytosol 24.57 22.68
PGSC0003DMT400043441 Potato cytosol 20.42 22.61
PGSC0003DMT400063740 Potato cytosol 22.15 22.3
PGSC0003DMT400031292 Potato cytosol 22.84 22.22
PGSC0003DMT400061566 Potato cytosol 22.49 22.11
PGSC0003DMT400054296 Potato cytosol 23.18 20.81
PGSC0003DMT400061562 Potato cytosol 22.49 19.76
PGSC0003DMT400014139 Potato cytosol 21.45 19.62
PGSC0003DMT400097622 Potato cytosol, mitochondrion 14.88 19.2
PGSC0003DMT400034146 Potato cytosol 9.34 16.36
PGSC0003DMT400034143 Potato cytosol 8.3 14.63
Protein Annotations
EntrezGene:102596184MapMan:19.2.2.8.1.4.6InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR001810UniProt:M0ZYP3PFAM:PF14299EnsemblPlantsGene:PGSC0003DMG400004257PGSC:PGSC0003DMG400004257
EnsemblPlants:PGSC0003DMT400010881InterPro:PP2-likePFscan:PS50181PANTHER:PTHR31960PANTHER:PTHR31960:SF2SUPFAM:SSF81383
UniParc:UPI0002961107RefSeq:XP_006364124.1::::
Description
F-box family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004257]
Coordinates
chr12:+:54257462..54260310
Molecular Weight (calculated)
32411.7 Da
IEP (calculated)
8.678
GRAVY (calculated)
-0.258
Length
289 amino acids
Sequence
(BLAST)
001: MGSSLSLFLN PRGSVAVPPA NPGLGDLPES CVASVMVYLN PSEICSLSML NRGFRAASSA DFVWESKLPI NYELLIDRVF GGVDDFSNNL CKRDIYARLC
101: RPSYFDGGSK KVWLDKGTGR VCLSISANGL AITGIDDRRY WSRIKTDESR FQSIAYLQQI WWVEVGGEVD FPFPAGSYSI FYRLQVGRSS RRFGRRICNS
201: EHVHGWDKKP VQFQLSTSDG QQATTQCYMK EPGKWKYHHV GDFTVTGSAA NMKVKFSMTQ IDCTHTKGGL CVDSVLICPS EFTERLKRF
Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)
001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
Arabidopsis Description
AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.